YALI0E32461g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E32461g

Location

Species Yarrowia lipolytica Positions 3851282..3853769
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2488 (nuc.)
Previous locus YALI0E32450r Next locus YALI0E32483g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32461g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32461gYALI0E32461g_mRNA-001YALI0E32461g_CDS-001

Nucleotide sequence

 

>YALI0E32461g
ATGCCTTCGATCAACATTCTCTGTTCGTCTGCTCTGCCGTTTGTGCCTACCAAGTTCCAG
ATAGATGCTCATGAGCATGAGACGGTTCTGGTGGTCAAAAAACGGCTTTGCCAGAAACTG
GTCGAGTTACAGAGACAGGGAAGTGTCGAAACGTCCACAGAGTCTTACAACCGAGAACAG
GAGCATTTGGGCAACCCGGGCAATCTGAAGCTGATTTTCGGAGGAAAGATCTTGCCCGAC
GCCAATGAACTGCCCAATTTGGCGGCCACAAACCCCACGTTCCATCTTCATTTGCTGCCT
GTTTCCCTCGACAAGGAGAAACTGAGCATTATTGAGAGGTTTCGAAGAGGAAGCACTAGT
AAGGGCGATGCGAATGGAGGAGCAGAGAGTTCTGGATCGACACCAGCGGAGTCTCAGACC
ATGTACAACGTCCGACTACTTTCGAATCAAGCAAAGCCCACGATTCACTACAACGTCCAG
CAACAGAGTCTGTACAACATGGACGGTGAGGCGTCTCTTGCTGACCTGAAGCATCTGCTC
ATCAACTCTCTGGGCAATGACACTGCTGTCAAGTCGCTGGATTTGGCTATTCAGCGCAAG
TTTGTGGTCTTCAACTCCAAGGGCCAAGATTTCTCGGACGACACCATGAAGGTCAAGGAT
ATCAACAACTTTGGGCGTCCTCCTCACTCGCAAGGCACGAACGTGGTGATATTTTACCGG
TTTGTCCTCGGCGAATTCGAGGAGTACCAGATGGAGGGTGAGAACGAGGTGCTTGAGAAG
CCTGCTGAGGCTCAATCAACCCCCGTCAAGTCCAATAACCCTTTCAACAAGGAGGTTCAG
CAGCAGCAGCAGCAGCAGCAGCAAGTCAAGAGTATGGTTGAACCTGATGGGTCATTGATT
CAGTTTGACCGAGAAACTGCTGCTGTTTCTGTCGCTACTTCACCATCTGCTGCGCTCTCT
GGCAACCCCCTCGCTGGCGCATTTACAGCCCAGCTGAATCTGGACAATGAGGGAAAGGGC
AAGGAGGTTGCTGAGGAAGTTGATGAGGAGGGTGATGTTGAGATGAAGGAAGGGAAGCCT
GTTCAAGTTGAGACCGTTGAGACACCGGTCCCTACGCCCACCATCAAGCACCTCTTCATC
AAGGACACCAGTCTCGGAGACTTCCATCTCAACCCCACAGATGTCAAGACAGGTAGCTGC
ACAGAATCCGAGTGGGTGGCTATTTCGCCTCGAGAAATGACCAGGCTCAAGCGAATGTAC
AGAGAATTTGGTAACTCGGAAACTGAGCCTAAGCGACGGAAGTCAGGCGAGTTTACCAGA
GAGACAGGAGAGGCTGTTGCCTCTGGAAGAGATATGGCCGGCAGAGGCCTACCTGGAAGA
GGTATGGGTCAGCAAATTGGAACGGGTGCTTCTACACCTTCTTCTGCTTCGGCTGCTTCT
AACCCTTCTACCTCTTCGGAATCCAACTCTGGACCCAGTTCGAGCTCTTCTTCCGACTCT
CACGCCAACAACCACCCCCATACCAGCAACCATTCCCACACCCACAACCACAACCACAAC
CACGCACATGTTAACCCAACTCCCAATAGTCACCTGCACAATGATACAGCCAACTCGACA
GACACAGAGGCTGAGGTGATACAAACTCCCCCTAGAGGAGCCGCTCACTCGCCTGGAAAC
ACCACTCCTGCATCTGACCAGTACCGTCAATTCCAACAGTTTCTGAGATGGGCTGACACC
CAGCATGAGGACCACACAGAGCCTGCGGAGTTTGACTACCGTCAGTTCCAGCAATTCCTC
CAGTGGGGTCAGGTCCAGCCTCCCACACAGCAACCCCTTGTTGACTTCTCGTTCCGGCTG
AGAATCTCGCCTCCTCCTTGGAATATTCGTCAGCGAATTCGGGAGATGATTCCCCCCCGC
GACCAACTTCGTCAGCGTGCGGTTGTGGCTGTTCGCCAGCTTGGCGAAGTGCTTGTCTTC
CTACTACAGCTTTTTGTCTTTTACATAATGGTTCTGGGTCGTATTAACAACGACTATATG
TTCTATGCGTCGTGTGGTCTCACTGTGATCATCTTTGTGGGTTACCGTTTTCGGCACCAT
CTGGAGCGGTTTCGTCCTGCGAGCTTCAACGTGGGTTCTGAGGAATTATCTCGAGTTGCC
CAGATTTTTCCTGCCGTGAACTACGACCAGGAGGAACCTGCTGCTGGAGGTAACAACGAG
GCTGTTCGAGAGGCTCTGGAAAATCCTGACAACCGGCATGCTCGGGGCGTCCGAATTGGC
GCTGCCTTCTTTGGCTCCATGATTCCCGCTGTCCATTCTCGATGGCTGGCTGATAACCGA
CAGCGACGAGTTCAGCTGGATGCATTGATTCGACAGCGAGAGCGTGAAGGAGAAGAGACT
CAGACTCAGGAAGGAGAGGATAACGAGGGTGACGAGGGAAACAACCGAGCCGAACAAAAT
GAGTAAATACTAATGAATTATGTGATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32461g_CDS-001

Protein length: 822 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E32461g_CDS-001 MPSINILCSSALPFVPTKFQIDAHEHETVLVVKKRLCQKLVELQRQGSVETSTESYNREQ
EHLGNPGNLKLIFGGKILPDANELPNLAATNPTFHLHLLPVSLDKEKLSIIERFRRGSTS
KGDANGGAESSGSTPAESQTMYNVRLLSNQAKPTIHYNVQQQSLYNMDGEASLADLKHLL
INSLGNDTAVKSLDLAIQRKFVVFNSKGQDFSDDTMKVKDINNFGRPPHSQGTNVVIFYR
FVLGEFEEYQMEGENEVLEKPAEAQSTPVKSNNPFNKEVQQQQQQQQQVKSMVEPDGSLI
QFDRETAAVSVATSPSAALSGNPLAGAFTAQLNLDNEGKGKEVAEEVDEEGDVEMKEGKP
VQVETVETPVPTPTIKHLFIKDTSLGDFHLNPTDVKTGSCTESEWVAISPREMTRLKRMY
REFGNSETEPKRRKSGEFTRETGEAVASGRDMAGRGLPGRGMGQQIGTGASTPSSASAAS
NPSTSSESNSGPSSSSSSDSHANNHPHTSNHSHTHNHNHNHAHVNPTPNSHLHNDTANST
DTEAEVIQTPPRGAAHSPGNTTPASDQYRQFQQFLRWADTQHEDHTEPAEFDYRQFQQFL
QWGQVQPPTQQPLVDFSFRLRISPPPWNIRQRIREMIPPRDQLRQRAVVAVRQLGEVLVF
LLQLFVFYIMVLGRINNDYMFYASCGLTVIIFVGYRFRHHLERFRPASFNVGSEELSRVA
QIFPAVNYDQEEPAAGGNNEAVREALENPDNRHARGVRIGAAFFGSMIPAVHSRWLADNR
QRRVQLDALIRQREREGEETQTQEGEDNEGDEGNNRAEQNE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG