YALI0E32241g

Overview

Description some similarities with uniprot|Q08873 Saccharomyces cerevisiae YOR367w SCP1
Locus type CDS
Locus tag YALI0E32241g

Location

Species Yarrowia lipolytica Positions 3825324..3826696
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1373 (nuc.)
Previous locus YALI0E32219g Next locus YALI0E32263g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32241g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32241gYALI0E32241g_mRNA-001YALI0E32241g_CDS-001

Nucleotide sequence

 

>YALI0E32241g
AAATCTCCACCACCACGAACATGCCCAAAAACGTTTCATCGTTAGACAGCGATCTGTCGG
AGCTGCGGGCTTCAAAATACGACGGCGCATCGACCGCAGAAGTGTCGGCATGGATCTCAA
CGGTCATTGGCGAAGAACTCCCCAAGGGGGAAGATCTGATGGACACACTCAGAGACGGAA
CCATTCTATGCAAGCTGGCAAACACCATCAAGCCTGGCTGTGCGACATCCAAAAAGTCTT
CCATGCCCTTTGTTCAAATGGAAAATATTGCCAGCTTTCTCAAGGCTGCTTCTTTTCTGG
GAGTCCCTCAACATGAGCTATTTGAAACCGTCGACATGTACGAGCTGAGAGACCCTGCCC
AGATTCTTGTGTGTCTCAAGGCGCTGTCTCGACATGCCCATAAGGTCAATCCCGACATTC
CTGTCATGGGCCCTAAGCTTGGAACTCCTAGCCCCAACGCTGGAAAGAAGAACTTCAAGG
CGGACACGTCAGGGCCCGCTTGGAACACTCATCAGTATGGCTATCTTGGAGGAGCGTCTC
AGGGATCGGAGAAGTTGGTTTTTGGCGGTCGAAGAGATATAATGACCGACGAGAAGACCG
AAGAGTCCAAGAAGATCAACATCAACTTTGGATCCGGCGGTTCTGGAGGGTCCAATGACA
CCAGTGGTAGCCCAGCGACCAAGAAGGGACCTCCTCCCATTCCCTCCAAGCCAAAGCACT
TGAAGGGTTTCGATCAAGGTGAGCATGAAGAAGATGAAGACGATGAGGTGGAGGATATGA
AACTGCACATGCTCAAGAGCAAACAGCAGACGGCACAGGCGGTGGAGGAGTATGATGCGT
CGGTATACGCCTACGACGACGTGTACGAAGATATGCACAACACCAAACCGGAACCCAAGA
CTCAACTAACGCAGTCTAAACACCTGGATGGTTTATTAGAAGCCAAGAGGAAACGAGAGG
AGGATCGATTGGTGGCCACAGAGGTGAAATTGAAACGCCAGCGAGCCAACGAGGGCGATC
TGTACGATGATAAAGAGAAGTTTGTCACCCCGGCATACAAGAGACAGCAGGAAGCACTCA
AGAAGGAGAGAGAAAAGGAGGCCAAGGAAAGTAGAAGTGTTTCATCTTTTTATGATACGG
TTGAGGCAATGGCTGGGAAAGGGGCAGGTGAGGAGACTTCACCGGTGCCTACAACAGAAG
CACCAACGAATTCGGCACCACAAGCAACATTTACAAATCCAAAGCCCTTACCTGTTTCAG
CACCAGCTCACACTGAAAAGATGGACAAGGTGGCTGCTGCTCGAGCTCGGTTTTTGGAGC
GCAAGAAGGGTATTAAATAGTTTTTATTATTGCATGATTGTATTTTTTTTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32241g_CDS-001

Protein length: 241 aa.
Product: Conserved hypothetical protein

>YALI0E32241g_CDS-001 MPKNVSSLDSDLSELRASKYDGASTAEVSAWISTVIGEELPKGEDLMDTLRDGTILCKLA
NTIKPGCATSKKSSMPFVQMENIASFLKAASFLGVPQHELFETVDMYELRDPAQILVCLK
ALSRHAHKVNPDIPVMGPKLGTPSPNAGKKNFKADTSGPAWNTHQYGYLGGASQGSEKLV
FGGRRDIMTDEKTEESKKININFGSGGSGGSNDTSGSPATKKGPPPIPSKPKHLKGFDQV
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG