YALI0E32219g

Overview

Description similar to uniprot|Q12291 Saccharomyces cerevisiae YLR063w hypothetical protein singleton
Locus type CDS
Locus tag YALI0E32219g

Location

Species Yarrowia lipolytica Positions 3824250..3825177
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 928 (nuc.)
Previous locus YALI0E32208g Next locus YALI0E32241g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32219g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32219gYALI0E32219g_mRNA-001YALI0E32219g_CDS-001

Nucleotide sequence

 

>YALI0E32219g
ATGTCTGAATCGTCTCAAAGCGTCCTCGATCTGTTCAGCTGGGCTTTCGAGAAGACCCTT
GCGCTCTCTGATGATGTGCTGACCGAGCGAATGCAGGCCGTCAAGTCCGATCTCTACAAC
CGAGACTATATGGCAGCGTTTGGTTCTCAGGACAATCTGGATGTCTATGCAGTCAGATGG
TCTCCCGCACGAGCACTGGCTTACCATGAACTCTTTAAACAGCACAATGTTCTTCGTCAC
GATAAACCCAACGTTCTGTGTATTGGCGGAGGAGCTGGGGGCGAACTCGCTGCCTTGTTA
GGTCTTATTGCTGAGACCCCTCAGAAAGATGAGATCAAGCTGAATATGGTCGACATTGCG
GCATGGGGAGAGTGTGTCAGTAAACTGGAAGGTGCGTTCCCCAACATTTACGACAAGAAC
ACCAACAAGGACGCCGTCACCACTACCTTTGTCCAGGGAGATGTCTTGATTCCTGAGACC
ATCCCATCGTTCGCGCCCTACACTTGCATCACTCTCATGTTCACCACTAACGAATTGTTT
GCCGAGAACAAAGCTCAGACTATCCGTCTACTTAACAGAATGACCGAACAATGTGAGAGT
GGGACTCTTCTCTTGGTCTGTGAGAGTGCCGGATCGTACTCTGATATCCAGATCAACGGC
AAGACCTTCCCTGTACATTTTCTACTTGACCATACTATGGCCAAGGGCCGAAACTCGACG
ACAGGACCCTGGGAGATTGTGAATCAGTCCAACAGCGAGTGGTTCCGAATCAACAAGGAG
CTGGAGCTGGTGTACCCCTGGAAGTTGGAGGATATGAGATACTTTTTCCGCCTTTACCGG
AAGGTGTAGACGATGGCGTAAAAAGGCTTGGGTCGAAAGTATCACCTCAGCTTATATATT
TGTATAATACTAATGCATTTTGAAGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32219g_CDS-001

Protein length: 283 aa.
Product: Methyltransferase required for m3U2843 methylation of the 25S rRNA, putative

>YALI0E32219g_CDS-001 MSESSQSVLDLFSWAFEKTLALSDDVLTERMQAVKSDLYNRDYMAAFGSQDNLDVYAVRW
SPARALAYHELFKQHNVLRHDKPNVLCIGGGAGGELAALLGLIAETPQKDEIKLNMVDIA
AWGECVSKLEGAFPNIYDKNTNKDAVTTTFVQGDVLIPETIPSFAPYTCITLMFTTNELF
AENKAQTIRLLNRMTEQCESGTLLLVCESAGSYSDIQINGKTFPVHFLLDHTMAKGRNST
TGPWEIVNQSNSEWFRINKELELVYPWKLEDMRYFFRLYRKV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG