YALI0E31933g

Overview

Description similar to uniprot|P53123 Saccharomyces cerevisiae YGL136c Putative ribosomal RNA methyltransferase
Locus type CDS
Locus tag YALI0E31933g

Location

Species Yarrowia lipolytica Positions 3795331..3796515
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1185 (nuc.)
Previous locus YALI0E31911g Next locus YALI0E31947r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31933g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31933gYALI0E31933g_mRNA-001YALI0E31933g_CDS-001

Nucleotide sequence

 

>YALI0E31933g
TTGCACGGTACACGACACAACACAGCCAAAAATGCGCCAAAAGCTGCCGTTCAACCCGCT
CCAGTCGCTTCTCCCGCGAATCTTTGTGCGGGGCAAAAAACACGATGCGCGCAGCCGCTG
GGAAATGCGCCAGATGAAAGACAAGCATGTGGCCATGGCCAAGGCTGACGGATTCCGGTC
TCGAGCCGCGTACAAGCTACAGGAACTCGACTCCATGTTCCGGCTGTTCAAGCCCGGCAT
GACGGTGGTGGATTTGGGCTTTGCGCCCGGCGCATGGAGTCAAGTGGCTGCTCAGCGAGT
GCGGCCTGGAGGCAGAGTTATTGGAGTGGATATCCTTCCTTGCATTCCTCCTCCAGGAGT
GTCCAGCATCCAGGGAAATTTCCTGTCCAAAGAAACACAAAACGAGCTCAAACGTGTGCT
GGCCGTCTCGGCGATGGGAGTTCCCAAGGACAAGGACTCTGGTGGCGCCATAGGCACTGC
TCCTCCGTCTTATCTGGACACTGAACGCGAGCTTGGCAGTATTAACAGCAACAGCAACGA
ACCCCAATTTGGCGACGACTACCCGGTAGATATAGTGCTTAGTGACATGTGCGAAACGTT
ACCCCAGGAACACGGATTTTTTCAAAGAACTATTAATGACCCATACTATAGGATGGCCAA
TGTTTCCGGCATAGCTGTGAGGGACCATGCTGCCAGTATTGTGAGTGAAGGAAGGAAGCG
CATTGGGTGTGGTGCAGCCAGCTTCGATGTGGCAGAAGGGAAGCCATAAGTGAAGCGCCA
CATACCCTCAGGGAGACCATCGGTCTATTCCCCATCCCCTTCTTACTAACCCAGGATCTC
TGTGATGCAGCCCTGCTGTTTGCTATCGATACCCTCAAGGTGGGAGGCTCTTTCGCATGC
AAGGTCTTCACCGGTGAGGAAGACAAGTTTCTACAGCAGCGGCTCAAGCGCATGTTCCAC
GACGTGAAGCGACGAAAGCCCGAGGCCACCCGAAAGGAGAGCAAGGAGTTGTACCTTGTT
GGTCTCAAGCGACGAAAGAACGTCACGGTTGAAAGCGTGTTTGGTGCGTAATCACGTACA
ATCAAACTAGTTGCATTGACCGAAGCCCGTGCATTGTTACAAACCTTTGCATTCTCTACA
ACCTGTATATATTGAATCATGATATGAATGATTGCGTTAATGGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31933g_CDS-001

Protein length: 281 aa.
Product: Mitochondrial 2' O-ribose methyltransferase, putative

>YALI0E31933g_CDS-001 MRQKLPFNPLQSLLPRIFVRGKKHDARSRWEMRQMKDKHVAMAKADGFRSRAAYKLQELD
SMFRLFKPGMTVVDLGFAPGAWSQVAAQRVRPGGRVIGVDILPCIPPPGVSSIQGNFLSK
ETQNELKRVLAVSAMGVPKDKDSGGAIGTAPPSYLDTERELGSINSNSNEPQFGDDYPVD
IVLSDMMANVSGIAVRDHAASIDLCDAALLFAIDTLKVGGSFACKVFTGEEDKFLQQRLK
RMFHDVKRRKPEATRKESKELYLVGLKRRKNVTVESVFGA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG