YALI0E31911g

Overview

Description highly similar to uniprot|P0CX43 Saccharomyces cerevisiae YPL220W (ohnolog of YGL135W) SSM1A ribosomal protein
Locus type CDS
Locus tag YALI0E31911g

Location

Species Yarrowia lipolytica Positions 3793674..3794467
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 794 (nuc.)
Previous locus YALI0E31889g Next locus YALI0E31933g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31911g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31911gYALI0E31911g_mRNA-001YALI0E31911g_CDS-001

Nucleotide sequence

 

>YALI0E31911g
ATGTCCTCTAAGATTACCGTCGCCGGCGTCCGTGGCAACGTCCAGAAGCTGCTCGAGCAG
TCCGAGACCAAGAAGCGAAACTTCCTCGAGACCGTTGAGCTCCAGATTGGTCTCAAGAAC
TACGACTCCCAGCGAGACAAGCGTTTCTCTGGAACCATCAAGCTCCCCAAGGTCCCCCGA
CCTAACATGACCATCTGTGTCTTTGGTGATGCTCTCGATGTCGACCGAGCCAAGTCCGTT
GGTGTTGATGCTATGTCCGTTGAGGATCTCAAGAAGCTCAACAAGAACAAGAAGCTCATC
AAGAAGCTCGCCAAGAAGTACAACGCCTTCATTGCCTCCGAGGCTCTGATCAAGCAGGTT
CCCCGACTTCTCGGACCCCAGCTCTCCAAGGCTGGTAAGTTCCCCACCCCCGTTTCCCAC
AACGAGGACCTCCACACCAAGGTCAACGATGTGCGATCCACCGTCAAGTTCCAGCTTAAG
AAGGTTCTCTGCATGGCCGTCGCTGTTGGCCACGTCGAGATGACCGAGGACGAGCTCACC
ACCCAGATCATGATGGCCGCCAACTTCCTTGTCTCTCTTCTTAAGAAGCACTGGCAGAAC
ATTGGCTCTCTGGTCATCAAGTCTACCATGGGCCCCCCCTTCCGACTCTACTAAGTTATT
CACTTATCTTGGAAAAGTTCTAAAAGTATGTTAATGCATCAAACAACAAAAACAAGCCGT
TAAAGCGTCAGCTGGCATGACGACTGTATTGTACGAGTAGTGATATGTATGTAATCTTTT
AGAGTGAGGCACAT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E31911g_CDS-001

Protein length: 218 aa.
Product: Ribosomal 60S subunit protein L1, putative

>YALI0E31911g_CDS-001 MSSKITVAGVRGNVQKLLEQSETKKRNFLETVELQIGLKNYDSQRDKRFSGTIKLPKVPR
PNMTICVFGDALDVDRAKSVGVDAMSVEDLKKLNKNKKLIKKLAKKYNAFIASEALIKQV
PRLLGPQLSKAGKFPTPVSHNEDLHTKVNDVRSTVKFQLKKVLCMAVAVGHVEMTEDELT
TQIMMAANFLVSLLKKHWQNIGSLVIKSTMGPPFRLY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG