YALI0E31845g

Overview

Description some similarities with uniprot|B6Q8N1 Talaromyces marneffei C2H2 zinc finger protein
Locus type CDS
Locus tag YALI0E31845g

Location

Species Yarrowia lipolytica Positions 3787122..3788383
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1262 (nuc.)
Previous locus YALI0E31823g Next locus YALI0E31867g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31845g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31845gYALI0E31845g_mRNA-001YALI0E31845g_CDS-001

Nucleotide sequence

 

>YALI0E31845g
ATGAGCGCTGCCACCATGTCCATAGCCACGGCGCTGACGCCGCAAGGCTCGCCCTCCATG
TCCTCCACAGGCACCAACACCTCTCCCGTCACTCGAGAACAGGACCGATTTACTCCCGCA
AATTCCGCCCCTTCAGCCCCTCCCGCCACAGTCAAGCCTATCCACAACAAGTCTGAGAAT
GAAACGGCTTCCAACCCAGAGACCGCCATTGGTAACAACCCCGCGGCCTCTACAGAGCCC
TCCACCGCGGCCAACATTACGACCGACGATGCCACCAACACCGGTGCTGCCGACGATGAG
GAAAAGGGCAAGTTTGTATGCCCTCTGTGTGAACACACCTTCACCCGACACCACAACCTC
AAGTCGCATCTGCTGACACACTCGCACGAAAAGCCGTTCACGTGTGAAACCTGCAACTCC
AAGTTCCGACGTCTCCACGACCTCAAGCGTCACGTGAAACTGCACACTGGAGAGAAGCCC
TACAACTGTGAAAAGTGTGGCCGAAAGTTTGCCCGTGGTGACGCCCTTGTCAGACACATG
AAGGGCTCTGGTACTTGCACTGGTATTAATGTCGATGAGCGAGACTTCCAGGGCTACCAG
CCATTGCAGCCCAAGGGTCTGAACACCCCCGTCCAGGCTAACTCTCAGGCCCTTCAGCAG
CCCCAGCAGCAGCAACACCAGCAGTCCACTCAGCCGTCTCCCGCCCAGGGAGGTCCTCTT
CTAGCTCCGGCTCCCTCTGCTGCCCCTACTCCCACTCCTCAGCAGCCTTCTCAACAGCAG
CAATCTAATACTCACGCTCACACTCACAGCCATCCTGCTCCTGATTCGTCGTCTCCTCCC
CCTGCTAAGAAGCGATCCATCTCGCCTTATCAGAACAAGAGCCCACCTTCGTTTGGCGCT
CCCGGCGGAGGCGGAGTCCCTGCCCCTGTTACTTCCACTCGTCACGTCTCCCACCTTCCT
CCTCCTCAGATGTACGTGCCCAGCCACCACTCCGCACAGGCTCCTCCCCCTCCTCACGGC
CGAGGCACCATGCTGCCCTACCCCGCGGCCTCTGGCGCGCCTGGCTCGACCGAAGAGCAT
CTTCTGGCGCTGGTCAAGACCCTGGAGTCGCGAATCTGGTCTCTTGAGGAACGCATCCAC
GTGACCGAGAGCCGAATTGCGTTCCTGGAGTCTGCCCAGCGGCCCCATTAAGACACCAAG
CCGGGCTTTTGTTTTGTGCTAACACTTATTTATATATAGAGAACGATGATGATGTGTATG
GA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31845g_CDS-001

Protein length: 397 aa.
Product: Conserved hypothetical protein

>YALI0E31845g_CDS-001 MSAATMSIATALTPQGSPSMSSTGTNTSPVTREQDRFTPANSAPSAPPATVKPIHNKSEN
ETASNPETAIGNNPAASTEPSTAANITTDDATNTGAADDEEKGKFVCPLCEHTFTRHHNL
KSHLLTHSHEKPFTCETCNSKFRRLHDLKRHVKLHTGEKPYNCEKCGRKFARGDALVRHM
KGSGTCTGINVDERDFQGYQPLQPKGLNTPVQANSQALQQPQQQQHQQSTQPSPAQGGPL
LAPAPSAAPTPTPQQPSQQQQSNTHAHTHSHPAPDSSSPPPAKKRSISPYQNKSPPSFGA
PGGGGVPAPVTSTRHVSHLPPPQMYVPSHHSAQAPPPPHGRGTMLPYPAASGAPGSTEEH
LLALVKTLESRIWSLEERIHVTESRIAFLESAQRPH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG