YALI0E31823g

Overview

Description weakly similar to uniprot|O94397 Schizosaccharomyces pombe sgf73 SAGA-associated factor
Locus type CDS
Locus tag YALI0E31823g

Location

Species Yarrowia lipolytica Positions 3783780..3785083
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1304 (nuc.)
Previous locus YALI0E31797g Next locus YALI0E31845g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31823g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31823gYALI0E31823g_mRNA-001YALI0E31823g_CDS-001

Nucleotide sequence

 

>YALI0E31823g
ATGCTGTCGAGGCTGGTTCCACAGACTTTGCTGAAACGAGCGTTTGGAGACGAGGGCGAC
AAGGTGGTGCCCCAGACCAACGGCTCACAGTACAAACGACGCAAACAAGACTCCATTCCG
AAAACGGCCTCCGACATCAGCGACTCGATTCTGCAGTGGAACTCGCCGGCCGACTCGGAT
CGGCCCTCCCTGCATCCCAAAGACGGACTGTTGCTTGCAAGTCTCAACCCCATCACGGCA
CCCTTGAGCTACCAGGTGTGCAAGCACTGCGAGCGGCCCATCATCGGCGACACCAACGTG
CACCTACAGCGATGCGCCGTCTACCAGGTGAGCCGGATTCAAAAGGAGCGGGACACCAGC
TCGTCTGCAAACACAACCAAGGTGTCCAAACGATCAGCCAACACCCCAACCTCTAAGGAT
ACAAAGGAAGTCAAGGAGATCAAAACCAAGAAAGAAAAGGCCGAAAAGGCACCCCCAGCT
CCCCGACGAAGTAAACCTCGAGAGGCCAAATCCAAAACATCCACAAAGGGCAAAGTTGTG
GATGTCGACAAACAGTGCGGAGTGCCCCTGCCAAATGGAGGACTTTGCGCACGCTCACTA
ACATGCAAAACACACGCCATGGGTGCAAAAAGAGCTGTCCAGGGAAGATCGGCTCCTTAC
GATGCTCTACTGGCCGACCTCCAACGACGTAATCAGCTTAAACTACAGCAAAAACGAGAC
GGCTTAGAAGAGGAGGAGGAATCCAGTGAACCCGTGGACCCCGAAACAGAGGTCAAAATG
GTGCTTGAAGCCGTACAGAGATCCACACCGGTGCCGCTCGAGAGAAAAGTCCTGATGCCT
GCTCGTATTTCTAACGGCTTTTTTCGAATGAGAGAAATGCTGGCAGGTGCCCTTATCAAC
AACCCAGTCGCTGACCCTACACACCAACGATCGGCTGCTGCCATCGGAGGACTCATTGGT
CAAGCTACAGCTTTCTACGCCGGAGACCCTGGGCAGCTGTATCATCTCAAACCACAGTAC
GAAACCAAGAAAAAATAACACCGTGGCTTCTGCCTTCAAACAAAATCGCATTTCCTGGAC
ACATCCAATAACATCACCAGACTCAACTATCAACTCTCAGCATCGCATCCGAACGAAAAT
CATCGCACGAACGACTCACACAATCATAAAATATCGTTGTGCAAGGGTACCTGGTGTACA
TACAGCACATCCGAGTAATTGAACTCGTATACAGCCAAGTATCCTCCCTTCTCTCATAAT
CACGTACGCATATATATCTTCCTAATTGAACATCGGTACTGGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31823g_CDS-001

Protein length: 346 aa.
Product: Conserved hypothetical protein

>YALI0E31823g_CDS-001 MLSRLVPQTLLKRAFGDEGDKVVPQTNGSQYKRRKQDSIPKTASDISDSILQWNSPADSD
RPSLHPKDGLLLASLNPITAPLSYQVCKHCERPIIGDTNVHLQRCAVYQVSRIQKERDTS
SSANTTKVSKRSANTPTSKDTKEVKEIKTKKEKAEKAPPAPRRSKPREAKSKTSTKGKVV
DVDKQCGVPLPNGGLCARSLTCKTHAMGAKRAVQGRSAPYDALLADLQRRNQLKLQQKRD
GLEEEEESSEPVDPETEVKMVLEAVQRSTPVPLERKVLMPARISNGFFRMREMLAGALIN
NPVADPTHQRSAAAIGGLIGQATAFYAGDPGQLYHLKPQYETKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG