YALI0E31793g

Overview

Description weakly similar to uniprot|D5GG78 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0E31793g

Location

Species Yarrowia lipolytica Positions 3780800..3782041
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1242 (nuc.)
Previous locus YALI0E31779g Next locus YALI0E31797g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31793g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31793gYALI0E31793g_mRNA-001YALI0E31793g_CDS-001

Nucleotide sequence

 

>YALI0E31793g
ATGTTACCAACACGTTCGCTAAGGTCCATGAAGGGCCGGCTGGCCGCTCTAGCCGAAAAC
GCCCGGCCCTCGAAGGAAGATCCGCACGCTGGCAAGATTTTCGACGAGAACGGAGAGGAG
GTTGTTCAGGCATTGAACTTCAACCAAGTCAAGGAACAGAACAAACGAGACGAAGATGAG
TTCCACAAAAAGTACCCTCGCCACATTGCCTACTCCAAGATGCCTTCCTACGCCTCGAAA
CAAGACCGCCTCAATGCCGAAACCGTTCCGTGGACGGGAGAAGAAGGGTTTGAACAAGGA
GTGCTTCGAATGTTAGAAGACGCACATAAGCCACTGGGAGGCCAGGCTGTGAGGAGCGGC
CAAGGTGTTCCGCTTCCCAAACGAGCTCCAAAGGTATCCGTATCCGCTCGACTATCTGGA
GCACGTGACCAGTCGCTGGACTACACCATGGACAAGGTGACCGGCACGAAACCTGTCAAG
GACGAGGAGATGTCTGCTACAAGGAGACGAGCGTTGGACTCCATGGGCACGCTCAATGGT
CCTGTTATTCTCAGTGGAATCCAGAGCATTGCCGATCAGCGTATCGAAGACGCCCGAAAA
CGAGGTCAGTTTGATGGTATCAAGCGTGGCGTGCCTCTAGACCTCAAGCACAGCTCCAAC
CCCATGATCGACGACACCGAGTACTTTCTCAACTCGATGCTCAAACGACAAAACATTTTG
CCACCGTGGATCGAGCGCCAGACTAAGTTAGGCGTCAAAACTGACAGGCTTATCTCCGAT
ATGCGTGTGTCCTTCATTCGACATGTTGTACATTCCGTCGTGCGCAAGTCGAAGCGTCTA
GAGGACGTTCTAGGGTCTCTCGACAAACACAGCTACGAAAATGGCGACCCCAGCTGGGAA
CAGAACGCATTAAAGTACCATGAAACCGCCCTGGAGGGCCTGAACTCTAGCATCCGGTCC
TATAACCTACAGGCCCCTCAACCGGCCAGACGGGGCTATCTTAGCTTCGAGGACATTCTC
AAGTGCGTCTACAGCGATGTGGACAAGGCGATTCGGCAGGAGGTGATTCGCGAGATGACA
GCAGAGAAAAAGAAGCCGCCACAGCTGTATGAACGCAAGGTGATTCGGGAGAAGGAGCTG
CCCAAGTGGCGGGTCAAGGACATGTGGGGTCATCTTTTTGGTTAGCCACATGACCAGTTG
TATATAAATATATATTTAATTTAGATAGAGTGACAAATGGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31793g_CDS-001

Protein length: 395 aa.
Product: Conserved hypothetical protein

>YALI0E31793g_CDS-001 MLPTRSLRSMKGRLAALAENARPSKEDPHAGKIFDENGEEVVQALNFNQVKEQNKRDEDE
FHKKYPRHIAYSKMPSYASKQDRLNAETVPWTGEEGFEQGVLRMLEDAHKPLGGQAVRSG
QGVPLPKRAPKVSVSARLSGARDQSLDYTMDKVTGTKPVKDEEMSATRRRALDSMGTLNG
PVILSGIQSIADQRIEDARKRGQFDGIKRGVPLDLKHSSNPMIDDTEYFLNSMLKRQNIL
PPWIERQTKLGVKTDRLISDMRVSFIRHVVHSVVRKSKRLEDVLGSLDKHSYENGDPSWE
QNALKYHETALEGLNSSIRSYNLQAPQPARRGYLSFEDILKCVYSDVDKAIRQEVIREMT
AEKKKPPQLYERKVIREKELPKWRVKDMWGHLFG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG