YALI0E31779g

Overview

Description Similar to uniprot|Q08960 Saccharomyces cerevisiae YPL207w YP07 Hypothetical 89.8 kDa protein
Locus type CDS
Locus tag YALI0E31779g

Location

Species Yarrowia lipolytica Positions 3778251..3780556
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2306 (nuc.)
Previous locus YALI0E31775g Next locus YALI0E31793g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31779g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31779gYALI0E31779g_mRNA-001YALI0E31779g_CDS-001

Nucleotide sequence

 

>YALI0E31779g
ATGTTTGATGAAATTCTGGACTTGTGGCACGGCTCCAGATTGATGCTGATCCCCATCATC
GGTCTGGTCATCTTCATCGTCTTGTTTGACGAGAAGAAGCCCGTTGAAGCCGAGAACGAG
ACTGTGGAGAAGTCTGCTGCAACTACGACTACGAACACCTCCTCCAGAGCTCTGGATGAA
AAGCCCCCCATGGCTGTGGATTTCACCACGTCTTCTTCGGTGGTTTCTTCCAAGCCCAAG
CGAGTCCCCAAGACCTTTGGAAAGGGCCCCAAAAAGCTGTCTGTGTCCCTGTCTTCTCAG
GTCTATGTCTTTTACTCCACTCTGACTGGATCCACAGAGCGATATGCTCAGCAGTTGTTT
GAGTATCTTTCTACCCAGACTAAAAAGGAGCCCATTCTTCTGAACGTGGACTATATCGAC
GATCTTGACGAGTACTTTGTCAGCTCCAAGGCTGGATCTGTCTACTGTTTCATTGTTCCT
TCTTATGAGACCGAGAGTCCTCTGGACTACTTCCTGGACGCCATCAAGGAGACTTACAAC
GATTTTCGAATCGACAGTAGACCCCTCAGCAAGGTCTGTTTCTCTGTTTTTGGAGTTGGA
GACAAGGAGAGCTGGCCCGAAAAGTTCTGTTACCAGGCCAAGGAGGTGGATCGAGGTTTG
GCCAAGCTGGGCGCTCGACGTCTCAACCCCCTGGGCAACGGATGTGTCAAAACCGATTTT
GAGACCAACATGGTGGAGTGGAGAGAGCATTTTGTGGACGCCCTAGCCGATGGAGTTGTT
CCTGAGGCCGACGATATTTGTTCTGATGACGAGGAAGAGGAGGAAGACTCCAAGGACGGT
ATTGTTGATGTTGAAGATATGGGCAAGATTATTGGCTCCAGCAAGCCCAAGCGAAAGTCG
GCCAAGGATATCATGGAGGCCGATTCTTGTTCTGCCAAGGAAATGGTTGCCAAGGACTCC
CCCACCTACAAGGCTCTGACCAAGCAGGGCTACACCATTGTCGGATCCCATTCCGGCGTC
AAGATCTGTCGATGGACCAAGTCTGCTCTTCGAGGCCGAGGCTCCTGTTACAAGTTTGCC
TTCTACGGTATCAAAAGTCACCTGTGTATGGAGACCACTCCTTCTCTGTCGTGTTCCAAC
AAGTGTGTCTTCTGCTGGAGACACGGAACTAACCCTGTTGGAACCACCTGGAGATGGCAG
GTTGATCCTCCCAAGGAAATCATCGACGGGGCTCTTGCTGGCCACTACCAGAAGATCAAG
ATGCTTCGAGGAGTTCCTGGAGTCTCTGCTGAGCGGTTCGCCGAGGCTTTCCGAGTCAAG
CATTGTGCTCTATCTCTGGTTGGCGAGCCCATCTTCTACCCTCACATTAACGAGTTTGTT
GGCATGTTGCATGAGAAGCGAATCTCGTCGTTCCTGGTCTGCAATGCCCAGCACCCCAAA
GAGCTGGCTGCCATGAACCAGGTGACCCAGTTGTACGTGTCTATCGACGCTGCCACCAAG
GAGTCGCTCAAGGCCGTGGACCGACCTCTGAACCGAGACTTCTGGGAGCGTCTGCAGGAG
TGTCTGTCGATTCTGCGGGAAAAGCGAAACCAGCGAACCGTATTCCGACTCACCCTGGTC
AAGGGTTTTAACGCCGAGGAGGTTGAGAACTACGCCAAGATGGTTGCCAAGGCCATGCCC
TGCTTCATTGAGGTCAAGGGAATGACCTACTGCGGAACTTCCAAGGGCAACCCTCTGACT
ATGAAGAATGTGCCTTACTACCACGAGGTCCTGGACTTTGTGGAGCAGCTCAACGAGGCT
GTAGCCAACGAGGGTCTCGAGTATGGCATCGCTGCCGAGCATGCCCACTCGTGCTGTGTT
CTTATTGCCCAGAAGCGGTTCTACATTGACGGCGAGTGGCACACCCATATCAACTATGAC
AAGTTCTTCGATATGCTGGAGGCCGGTCAAGAGTTTGGACCTGAGGACTACACCTCTGCC
ACTCCCCACTGGGCTCAGTACGGCGCTGAGGAGGCTGGTTTCAACCCTGCTGATGTCAGA
CATCGACGAGGTAAGGTGGTTGAGGTGTAAAGGAGGTGAACGGATGAGAAGCAGTAGGTG
ATTGTATCATAGAATACATCTAGACGGACTAAAGTCGGATTCAGAGAGAGTCCGGCTGAC
ATTTAAAAAAGGATATAAATAATTAATCGGGTTATTAAGGATTTTGAGTGGAATGGGGAC
AGCTACAGTAGAACGGCTTGTTACTATGCTCGAAAGTCAACAATAAAGTCAACAAAATAT
TTAATGATCAAGTAATTTGAAATGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31779g_CDS-001

Protein length: 690 aa.
Product: Iron-sulfer protein required for synthesis of Wybutosine modified tRNA, putative

>YALI0E31779g_CDS-001 MFDEILDLWHGSRLMLIPIIGLVIFIVLFDEKKPVEAENETVEKSAATTTTNTSSRALDE
KPPMAVDFTTSSSVVSSKPKRVPKTFGKGPKKLSVSLSSQVYVFYSTLTGSTERYAQQLF
EYLSTQTKKEPILLNVDYIDDLDEYFVSSKAGSVYCFIVPSYETESPLDYFLDAIKETYN
DFRIDSRPLSKVCFSVFGVGDKESWPEKFCYQAKEVDRGLAKLGARRLNPLGNGCVKTDF
ETNMVEWREHFVDALADGVVPEADDICSDDEEEEEDSKDGIVDVEDMGKIIGSSKPKRKS
AKDIMEADSCSAKEMVAKDSPTYKALTKQGYTIVGSHSGVKICRWTKSALRGRGSCYKFA
FYGIKSHLCMETTPSLSCSNKCVFCWRHGTNPVGTTWRWQVDPPKEIIDGALAGHYQKIK
MLRGVPGVSAERFAEAFRVKHCALSLVGEPIFYPHINEFVGMLHEKRISSFLVCNAQHPK
ELAAMNQVTQLYVSIDAATKESLKAVDRPLNRDFWERLQECLSILREKRNQRTVFRLTLV
KGFNAEEVENYAKMVAKAMPCFIEVKGMTYCGTSKGNPLTMKNVPYYHEVLDFVEQLNEA
VANEGLEYGIAAEHAHSCCVLIAQKRFYIDGEWHTHINYDKFFDMLEAGQEFGPEDYTSA
TPHWAQYGAEEAGFNPADVRHRRGKVVEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG