YALI0E31548g

Overview

Description similar to uniprot|Q871A4 Neurospora crassa cyp-6 Peptidyl-prolyl cis-trans isomerase-like 4
Locus type CDS
Locus tag YALI0E31548g

Location

Species Yarrowia lipolytica Positions 3724090..3725799
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1710 (nuc.)
Previous locus YALI0E31537g Next locus YALI0E31551g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31548g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31548gYALI0E31548g_mRNA-001YALI0E31548g_CDS-001

Nucleotide sequence

 

>YALI0E31548g
ATGAGTGTACTGATTGAGACTACCAGTGGTGAGTACGACCCAGAAACAGGTACAACCGAC
ACAAGTGCTAACACAGGCGATCTGGTTGTTGATCTAGACACTGCTGCAGTGAAAGAATGC
ACTCGGTTTCTCGAGTTGTGCGAAAATGAAGATTTCAACGGAGTCATGTTGGAAATGAGT
GGCAAGGTGCTGAGCACACTGAGGGGAGGCAGCGGTATTTCTGGGGGCCGTGACGGTGGT
TCTAGCTCTGAAGTCGGAGCTGTTGGATTCAGTGAGAGTGGAGATCTTCTTTTTTCACTA
GGAGAGAAACTGGATCATGCCTTGGGACACATTGTGGAGGGCGCGGAGTTACTAGAGGGT
CTGAACGGAGGCAGCATCGAGATCATTCATGTTCTAGAGGGCCTGGAAACTGGTGAAGAG
GGTGAAGATGCTGCGGAAGATTCTGTAATTGGCGATGATGGTACCAAGGAAGACACTGGG
CTACAGGCTGGATTGAACATCACGAAAGCAGATTCAGCCAAGGCAACCCATGCAGCGCCA
TCGGAAACTACCTCTCAAGCTTTGACTCTTGAAATCATCGGTGATTTGCCTTTTGCTGAG
ATAAAACCCTCCGAGACAGTCTTGTTTGTGTGCAAGCTCAATCCTGTCACGGAAGCTGAG
GATCTGGAGCTCATTTTCTCCCGGTTCGGCGAGATCACTGGGTGTCAGATTGTCAAGGAT
CCTGTAACCGGTAGCTCGTTACAGTATGGGTTCATTGAGTATACTACGCGGGAAGACTGT
GAGAGAGCCTACTTGAAGATGGAGGGTGTTCTTATTGATGATCACCGGATTCATGTTGAT
TTCAGCCAAAGTGTGAGAAAGATGCAGCAGAGAAAACAAGGTGGAGGTGGCAGGGAGTGG
CGGGATTATGACCCTGAAGAGAGGAGATCTGGTAGAGATAGCCGATCTGATCGTGATTCC
CGGCATAGAAGGTCTGACGACAAAAGGTCTGTCGACAGAGGAGCAGATAGACAGTCAGAT
AGAAGGTCGCATCGTTCGGATCGTGACTCCAGAGACTCTCGGTCCAGTAGGACTAACAGA
AGTTCCAGATCGGATAGAGATTATAGAGAGAGTCGAGACAATAGCGACTCACATGACTCT
AGAAGATCACACAGGGATTCACGTGACTCACACAGATCAGGCCGAGACAGAGACAGAGAT
AGGTCTCCTGGTCGGTCCAGACGGCCTGACAGAGATAGACGGGACAGGGATAGAGACTAC
GATCGCGACAGAGATAGAGATGAGCGTGACAGCCGCGATAGACGTGATAGACGTGATAGA
CGTGAGGGGCATGAACGGGAGTCTGACAAGCGTTCCCACCGTCCACTTCGTTCTGACAAG
GACCGTTCAGAAAGACGATCAAGACACTAACTCTTTCACTAACCGTCTGTCCTGTCTCTT
GTCTCAAGCTCTACGACCATTTCACGGCCCACATTCTTGCAGAGATTGCCTTCGAAGAGA
GCATGGTTGGAATGATGCTTGCTAAAAATAGTGGTTAACTCTCTTCTCTTACACTGGTGC
CAGTCCGATAGTCTGGCTTGAAGAGATGAGCTGCTGCCAAAGCGTCGTACCACGGTCATA
CAAGTATGGTATCTGTGGCAGGGGTCCAATGTACAATTTCCCACGATCTTTTCGGGCCCC
TACATAGCACTAATGTACCCCTATGAGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31548g_CDS-001

Protein length: 454 aa.
Product: Peptidyl-prolyl cis-trans isomerase-like 4, putative

>YALI0E31548g_CDS-001 MSVLIETTSGDLVVDLDTAAVKECTRFLELCENEDFNGVMLEMSGKVLSTLRGGSGISGG
RDGGSSSEVGAVGFSESGDLLFSLGEKLDHALGHIVEGAELLEGLNGGSIEIIHVLEGLE
TGEEGEDAAEDSVIGDDGTKEDTGLQAGLNITKADSAKATHAAPSETTSQALTLEIIGDL
PFAEIKPSETVLFVCKLNPVTEAEDLELIFSRFGEITGCQIVKDPVTGSSLQYGFIEYTT
REDCERAYLKMEGVLIDDHRIHVDFSQSVRKMQQRKQGGGGREWRDYDPEERRSGRDSRS
DRDSRHRRSDDKRSVDRGADRQSDRRSHRSDRDSRDSRSSRTNRSSRSDRDYRESRDNSD
SHDSRRSHRDSRDSHRSGRDRDRDRSPGRSRRPDRDRRDRDRDYDRDRDRDERDSRDRRD
RRDRREGHERESDKRSHRPLRSDKDRSERRSRH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG