YALI0E31537g

Overview

Description weakly similar to uniprot|Q3E784 Saccharomyces cerevisiae YER180C-A SLO1 Protein interacting with Arl3p, which is a GTPase of the Ras superfamily involved in vesicle-tethering at the Golgi
Locus type CDS
Locus tag YALI0E31537g

Location

Species Yarrowia lipolytica Positions 3721636..3722162
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 527 (nuc.)
Previous locus YALI0E31515g Next locus YALI0E31548g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31537g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31537gYALI0E31537g_mRNA-001YALI0E31537g_CDS-001

Nucleotide sequence

 

>YALI0E31537g
ATGTCCTCGCCACCACGAAGTAGAGCCGCGTCTAGAGACCCCCCGATCATGCTGTCGTCG
TCGACTAAGGCCGGGACCCCCAAATCAGCATCGCGGTCCACGTCGCCCCGACGTGACTCG
TCCGACATTGAGCGAATCAGCAAGGAGAAGGTGCTGGTGATGCACCAAGAGGCCCAGCAC
ATGCAGGAATCGCTGGCCGAGATCTTTGACCGCATTGTCAAGGTCAAGGAGGAGTACGAA
AAGCTGGATACCGAAAACAAGTTCCTTCAGGACTACATTGGCAACCTCATGGCCACTTCC
ATGTAATCTGGTGGTATCAACAGGTAAGTCGCGATACAGAGCGGCAAGCACAGTTTCAAC
CACACCCACACATACACACACACACACACACACACACACACAAACTCACACCGATAACAG
CTGCCTCTCAGCGAACCAGAACTGACACAACGCCACTCGTTATGGCCTCCGCATCTATGC
TGGCACTTTGCATCTAGCCGCATTGTAATTTATTTGTATATTTTGAT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E31537g_CDS-001

Protein length: 102 aa.
Product: Conserved hypothetical protein

>YALI0E31537g_CDS-001 MSSPPRSRAASRDPPIMLSSSTKAGTPKSASRSTSPRRDSSDIERISKEKVLVMHQEAQH
MQESLAEIFDRIVKVKEEYEKLDTENKFLQDYIGNLMATSM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG