YALI0E30371g

Overview

Description weakly similar to uniprot|P40033 Saccharomyces cerevisiae YER050c RSM18 component of the mitochondrial ribosomal small subunit
Locus type CDS
Locus tag YALI0E30371g

Location

Species Yarrowia lipolytica Positions 3580386..3581121
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 736 (nuc.)
Previous locus YALI0E30349g Next locus YALI0E30393g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30371g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30371gYALI0E30371g_mRNA-001YALI0E30371g_CDS-001

Nucleotide sequence

 

>YALI0E30371g
ATGCCGACCCTTATTCCTCATTTACTGTATAAGGTACGAGTAGTCGGGGATGTCTCTTAC
ATGTCTCTGCTGAGTAAGCAGAGCCAAAATCTTTCAACCTTCTCCCACAGTTCGCCCATT
CATACAAGCACTACACACAACAAAATGCTCAGAACCATTCGATCGGTCCGATCTTACTCC
ACAGAGGCTTCGGCTGGCGCCGCCGCTAAACGAGTGATGGGACGAGGAATGCAGCAGCAG
AAGGGCCAGCAGAAGGGCCAGCAGGGCCAGCGAACCCGCCCTAGCTTCATGCTCAACACC
AAGTTCACCAAGGGTCGAAAGGATCAGGCTCAGTCCGACAACTATCCCAAGATCAACAAC
ACTCTGGTTCCTAAGTTTGCTCTAGGTCAGATCTACACCCCCTTCAATATGACCGTGAAG
GCTGCCACCCAGAGCAAGACTGAGGGTGCCCAGAAGGTGGATCAGTTCAAGGAGGCCAAC
TTCGATCCCGTCAAGCTGTGGAAGGATCGAATGTCTCTGTCGCACTACGTTAACTATTCT
GGTGGTATTTCCGGAAGTCACACTCACCACCTGAGCAAGCAGTCTCACAAGAAGATTTCC
AAGGCCATTCGACGATCTCGATGTGCCGGCATCATGCCCTACCTTCACAAGGCTCCCGAG
ACCCTCAAGGGTCGAGGTGGCATGTAAAATCTGTATATAACGCAAGGTGGCAATAAATTA
AACATGATCATACTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30371g_CDS-001

Protein length: 229 aa.
Product: Conserved hypothetical protein

>YALI0E30371g_CDS-001 MPTLIPHLLYKVRVVGDVSYMSLLSKQSQNLSTFSHSSPIHTSTTHNKMLRTIRSVRSYS
TEASAGAAAKRVMGRGMQQQKGQQKGQQGQRTRPSFMLNTKFTKGRKDQAQSDNYPKINN
TLVPKFALGQIYTPFNMTVKAATQSKTEGAQKVDQFKEANFDPVKLWKDRMSLSHYVNYS
GGISGSHTHHLSKQSHKKISKAIRRSRCAGIMPYLHKAPETLKGRGGM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG