YALI0E30107g

Overview

Description some similarities with uniprot|Q9VYU0 Drosophila melanogaster CG32662 protein
Locus type CDS
Locus tag YALI0E30107g

Location

Species Yarrowia lipolytica Positions 3554409..3556201
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1793 (nuc.)
Previous locus YALI0E30085g Next locus YALI0E30129g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30107g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30107gYALI0E30107g_mRNA-001YALI0E30107g_CDS-001

Nucleotide sequence

 

>YALI0E30107g
ATGGTGCACAAAAAGGCGTATCTCTGGCTGTTTGCTGCACTTTCACAAGCGCTTCCCATA
GAGGAAACAAAGACAGTTGCCACTGAGGTGTCGACAGTGGACCCTTCCCACTCTGTACTT
CGGCTGGCTCTCGAAGCCACCGACACGCCCATGAACCGAGAAAACCACAAAGCAACTGCT
GGCAAAGACGTCGGTCGCATGATTGGCGAAAATAAGGCATCACTGAATCTGGCTGGTCAG
CTGACAGGTCAGATGCGAGGCCAGATGAGCAAGTTGGAAATGCATCTGGCTGGTGCCGAA
GTACAGCAGGGGTTTGCAGAACCGCCTCCCCAGCATGTGTGGGTCGAAGGCTTTCTGGAC
CCCAAGGACAAGGATGAGCTGAAGGCCCTAATCCTGGAATCTATGAAGGAAAAAATCAGA
ACTGCCCGAAAGCAGGACGCAGAGAAGGATGAGAAAGCACAGCAGAAGGTTCTCGAGGAA
CTGTGGTACGGTTCGGAGGACTCTAAGCGACAAGAGGAGGATGAACGCACCCAGAAGAAC
AAGGTGCAGCGTCAATATAACTACGACTTGCTGAAACATGAACAGGAGAATGGACTGGCC
AATCTAAAGGACAGAGTGAACAAGTTAAAGGATTCAGATTACTTCGAGAAGCATTCGAAC
AGAAAAAACGACATCTCTGTCACTCTTGTGACCCCGGTCGACGCATACCAGCAGGAGGGA
GTGGAGAAGACGCGTACCAAGGACAACAGAAAGCAATATTGTGATTTGCATGAGCATAAC
AAGGTCAAATGTGTCTTTGTTGAGGTCGAGACCAAGCCCAACCCCGCATCTAACCCTCAC
TCTCCAGCAGGAGGAGGCTGGCAACCTAAGTATGACGCTGCTCTGAAGTATCTGGATGCT
ATCATCTCCGTCATGGCTAAGGCTGAGCAGGTACCTCTAATTGGAACTGGACCTCTCGAG
GCTCTGGAGCAGATCAAAGGCGATTCCAAATTCAACCAGGAGCAGGGACATGAGGAGTGG
CTATGGATGCTGGACAACAACGCCTACATCACTCATCCTTCTGTTGATGTGGCATCATGG
GTCCTGGACCCGGAGGTGCTGGCTGAGATGGCCCTTCCAGATAGACAACTGCGGCATGGA
GATGGCTACTACGATAAGCGTGCCAAGACTGAAGCGAGGACAAAGGAGGAAGAAGAAGGT
GACACCCGAAAGAGACGACTGGAAAACGATCCTATTATGGTCATTGCTCTGGACAATGAA
GGTGGATTCGACCTGTCGTCCTTCTTTCTAAGAAAGTCGAGATACACCTACGAGCTGCTT
CATCTGTGGAGAACTTATGCTTCAGATATGAGCAAGGACTCCGATCTGCATAAATATGAC
GGCCGATCTAATGCTCGACTTAAAAATGCTCTTTACACCGTGTTTGTGCATCACCAGCAT
CTCAGAGACAGAGTGGCTGTGGTTCCCTCGAGATTGATGGCGGGTCAGACGTACCAGCGA
ACACTAAAGGATGCTGCTGTCAAGGACCAGCTTGAGGGTATCGACAAACCTCAAGAGACC
GAGCAGATGGATAAGGTGATGGTTCCTACGGAGATTGCCCAGCAGAACCAGTGGAGCAGT
GGAGATTTCGTCGCCACTCTTCCCCGAGAGTGTCCCGAGAACCTCAAGGAGCATTGCGCT
AAATACACATTTTTCTGGGCTGCTGCTAGTTTAGCCAATGAAGGTAACCACTGACTGCAG
CAACATATTTCAACACAGTTAAAATTGTATAATGATGATATACAATATGATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30107g_CDS-001

Protein length: 578 aa.
Product: Conserved hypothetical protein

>YALI0E30107g_CDS-001 MVHKKAYLWLFAALSQALPIEETKTVATEVSTVDPSHSVLRLALEATDTPMNRENHKATA
GKDVGRMIGENKASLNLAGQLTGQMRGQMSKLEMHLAGAEVQQGFAEPPPQHVWVEGFLD
PKDKDELKALILESMKEKIRTARKQDAEKDEKAQQKVLEELWYGSEDSKRQEEDERTQKN
KVQRQYNYDLLKHEQENGLANLKDRVNKLKDSDYFEKHSNRKNDISVTLVTPVDAYQQEG
VEKTRTKDNRKQYCDLHEHNKVKCVFVEVETKPNPASNPHSPAGGGWQPKYDAALKYLDA
IISVMAKAEQVPLIGTGPLEALEQIKGDSKFNQEQGHEEWLWMLDNNAYITHPSVDVASW
VLDPEVLAEMALPDRQLRHGDGYYDKRAKTEARTKEEEEGDTRKRRLENDPIMVIALDNE
GGFDLSSFFLRKSRYTYELLHLWRTYASDMSKDSDLHKYDGRSNARLKNALYTVFVHHQH
LRDRVAVVPSRLMAGQTYQRTLKDAAVKDQLEGIDKPQETEQMDKVMVPTEIAQQNQWSS
GDFVATLPRECPENLKEHCAKYTFFWAAASLANEGNH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG