YALI0E30085g

Overview

Description some similarities with uniprot|D5GAC8 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0E30085g

Location

Species Yarrowia lipolytica Positions 3551914..3553643
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1730 (nuc.)
Previous locus YALI0E30041r Next locus YALI0E30107g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30085g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30085gYALI0E30085g_mRNA-001YALI0E30085g_CDS-001

Nucleotide sequence

 

>YALI0E30085g
ATGATCAAAGCAGATAACGCCTTGCTGCTGGAGGAACCACTCCTGCGTGTGCCTTATGAG
ATGCTTCGTAAGAATCTCAAGACGGTGCACAAACATATGACCCAGGAAAGCACCATGGTC
GAACAGACGCTGAGTAAGTTACAACAGAGTACTCAGCATGTGGCTGCCGAATATGGCGAG
AAGCAGCAAGAGGAGGCTCGTGAGAGCCTTGATCAACTCATTTCACGAGTCCGAGGCTTG
AAGCGGAAGATTGCCACTCTAAAGGACGAACAAAATGAGACATTAACTACCACAAAGGCT
AGAGTGGAGCATTTGAATGTCATCTTCGACAATGAAAAGGAAACCGACCCTGAGAAGCAG
AAGGAGACGGAGAAGAAGTGGTTGAGAACACGGCTGGAGCGACTGCTTACCGACTACTTC
CTCAGGCAGGGCTTCTCTGAAACCGCCAAATCATTTGCTCAAAACAGAGGCATTACTTCG
CTGGTTGACGTTACCATTCTGGACCAATGCATTTCCGTTGAGACTTCACTGCGACAACGA
CACTCTACTGCGGAGTGTCTTGCCTGGTGTTCTGAAAACAGATCGTTTTTGAGGAAAACA
AGAAGCTCTCTGGAGTTTGAGGTTCGTCTACAACATTACGTTGAACTTGTCAAGAGTGGA
CGAGTGGAGGACGCTCTCAAGTATTGCCAGAGGTTCTTGTCTAAGAATGCTGACATTCAT
CTGAGAGAAATTCAGCAGGCGGCAGGACTTCTAGCATTCCCCCCTGGTACAGAGGGGTCT
CCCTATAAGGACCTTTATGCCTGTGAGAGATGGAACCAGCTGTCGCGGAAGTTCGTGCAG
ACGTTTGCAGATGTCCATGGCCTTTCGGACGGCTCTTCTTTGCTCTACACGCTATCCACT
GGCCTCTCAGTCCTTAAGACGCACTCTTGTCGAAACTTCGGAGCTCCTGCCGAGCTCCCC
ATCACTGCGGACAAGGACGAAGACATGGACCCCTCATTGACTTCATCTGCCCGTCCATAT
GCTCGTCGCTCGGAAAACCTTCCTAGTGTTTTTGGTTCTGGCTTCTCAATTAGAATGTAC
GGCTCTGACGAGATTCGAGGACTCGACACTCTTCCTGTCATACCTCCTCGAGCTTTGGCC
AACCTCAGTAGCATGCGAAGAGACATTGCAATGCAAAATAATCTGGACCTGGAGGAATCC
ATTGAAGATGATAATGAGGAGAGTGAAGAGCGAACTTCAGGCGATGGTGAACGTGACAGC
GATGGGGCTGTACCTGTGGAGGAGCTCGAGGAGCTTCCTGATGCTCCTCCAGAGCTTCTC
TCTGCAGAATACCTTGCACGGCGAATTGAGGAAGCTACCAAGGAGAACACAGACATCATT
CCCAAGACAACTCTAGACATGTTCAATCACTTTTACCCTGGGTGTTGCACCTCGCATCAG
TTGTCGCGTGCAGATGCGTGTCCCGTGTGTTCTGTGGAGCTGAACTCCCTTGCTGAAAAT
CTCCCATATGCTCATCACATTCGATCGCACTTGGATGCCGACCCTGTAGTGTTGCCCAAT
AGCAGAATCTTTGGCCGAGCGAAGCTCATGGAGTACTCCCACAAAATGATGAAGGCTGCT
CCCAACACTGTCGTTGACCCCACATCTTTTGAGTGCTTCAAGATTGATGAGCTCATTACT
GCTTACCCTAGTTGATATATGTTATTTATTCTCAAATATGTTGAAATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30085g_CDS-001

Protein length: 565 aa.
Product: Conserved hypothetical protein

>YALI0E30085g_CDS-001 MIKADNALLLEEPLLRVPYEMLRKNLKTVHKHMTQESTMVEQTLSKLQQSTQHVAAEYGE
KQQEEARESLDQLISRVRGLKRKIATLKDEQNETLTTTKARVEHLNVIFDNEKETDPEKQ
KETEKKWLRTRLERLLTDYFLRQGFSETAKSFAQNRGITSLVDVTILDQCISVETSLRQR
HSTAECLAWCSENRSFLRKTRSSLEFEVRLQHYVELVKSGRVEDALKYCQRFLSKNADIH
LREIQQAAGLLAFPPGTEGSPYKDLYACERWNQLSRKFVQTFADVHGLSDGSSLLYTLST
GLSVLKTHSCRNFGAPAELPITADKDEDMDPSLTSSARPYARRSENLPSVFGSGFSIRMY
GSDEIRGLDTLPVIPPRALANLSSMRRDIAMQNNLDLEESIEDDNEESEERTSGDGERDS
DGAVPVEELEELPDAPPELLSAEYLARRIEEATKENTDIIPKTTLDMFNHFYPGCCTSHQ
LSRADACPVCSVELNSLAENLPYAHHIRSHLDADPVVLPNSRIFGRAKLMEYSHKMMKAA
PNTVVDPTSFECFKIDELITAYPS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG