YALI0E29865g

Overview

Description similar to uniprot|Q08952 Saccharomyces cerevisiae YPL196W OXR1 Chromosome XVI
Locus type CDS
Locus tag YALI0E29865g

Location

Species Yarrowia lipolytica Positions 3533183..3533910
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 728 (nuc.)
Previous locus YALI0E29843g Next locus YALI0E29887g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29865g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29865gYALI0E29865g_mRNA-001YALI0E29865g_CDS-001

Nucleotide sequence

 

>YALI0E29865g
ATGGACTCTTCAGACAGACCGTCGCTTCGCCAAAGACTAAGCAATTGGGGCCGAACCGAC
ACGAAACCGGCCGCTACCGACTTAACCGCACCCCCTAACGACCCTAGCGAAAACATGGAA
CTGCCTCCTCTTCCTCCTGTGGAGCTCCTGGGCTACTCCCACTCCACCCGTACCAAGATC
ATGACCACCGAGCTTGCTGACGAAATTCGAAACCTGGTTCCCGAACGAATCAAACTGTAC
CGATCGTGGCAGCTGCAGTACTCTCTGGAGCAGCATGGTACTTCTCTGACTACTCTATAC
CACCGAAACATCCCTCCTCATGGAGACACTGCTCGAAATGGCTTCGTTCTGGCCGTCAAG
AACTCCAGAGGTCAGGTGTTTGGTGCATACACGGACCAGCATTACCATGTTGGTGGCAAA
AAGTTCTACGGTAACGGTGACTGCTTCCTTTGGAAGGTAAAGAATGCAGACTCGTTCCAG
GCTTTCCCCTATACTGGTGAGAACAACTTTGTGGTCTACTGCAACCCTCACTTCTTGTCT
TTGGGTGGAGGAGATGGCAAGTACGGCCTGTGGCTGGATGACGCCCTCAAGACAGGTGTC
ACCTACCCTTGTGCCACCTTTGGAAACGAGCCTCTGGGAGACGAGAAGTTCGATGTGGTG
GCAGTGGAGGTCTGGAGAGTCGGAGAGTAGAGCTACACGTAATGTTGGAATGTATTTATT
GTCTGAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29865g_CDS-001

Protein length: 230 aa.
Product: Conserved hypothetical protein required for oxidative damage resistance, putative

>YALI0E29865g_CDS-001 MDSSDRPSLRQRLSNWGRTDTKPAATDLTAPPNDPSENMELPPLPPVELLGYSHSTRTKI
MTTELADEIRNLVPERIKLYRSWQLQYSLEQHGTSLTTLYHRNIPPHGDTARNGFVLAVK
NSRGQVFGAYTDQHYHVGGKKFYGNGDCFLWKVKNADSFQAFPYTGENNFVVYCNPHFLS
LGGGDGKYGLWLDDALKTGVTYPCATFGNEPLGDEKFDVVAVEVWRVGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG