YALI0E29843g

Overview

Description similar to uniprot|P53158 Saccharomyces cerevisiae YGL079w hypothetical protein singleton
Locus type CDS
Locus tag YALI0E29843g

Location

Species Yarrowia lipolytica Positions 3532378..3532967
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 590 (nuc.)
Previous locus YALI0E29801r Next locus YALI0E29865g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29843g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29843gYALI0E29843g_mRNA-001YALI0E29843g_CDS-001

Nucleotide sequence

 

>YALI0E29843g
ATGCACACCCGAATGCCGTCTGTCAACTCTCAGACCTTTGCGGTTCCTGAGGGCTCTGAA
TCGGAAGACCACTCCGAGTCGGGGTCTTCTTACGCCGGATCGTCGCTCAACGAAACGGCT
CTTGATGTGGTGGTTGAACAATTCACAGCTCAGTTCAATCCTGCCAGATTGGACAGAAGT
ATGGCTCAGCAGAGTCAACTGAGTGGACAGATGAATGCGAAACAGCGAGAAGTCGACGAA
GCCATCACCAAAGTGACTCAGCGGCTGGAGGAGATGAAAAGAGTGGTTGCAGATGGACAG
AAGAATGTCAAGCAGGTGAATGCGCTTTTGGAGAAGTGCGCCAAAAAGACTGACAAGCTA
CAGGCAGAGACCAAGTCGCAGTTCCCGATTGAATACGCCCAAGCAGGGGAGAAGTACTCT
GATCACTGAAGCCGGGTACCACTTGATTGCTCTGATTTGCCTTCCATGGTGATATAATGT
CCCCCTACGAATGATTCATGACTACTAGGCCAAAGGACCACCCACCATACCTTTGATGGA
ATACATCAGCAGCTGCGCTATATACTTATTTATTACATAATTTCTTTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29843g_CDS-001

Protein length: 143 aa.
Product: Subunit of the BLOC-1 complex involved in endosomal maturation, putative

>YALI0E29843g_CDS-001 MHTRMPSVNSQTFAVPEGSESEDHSESGSSYAGSSLNETALDVVVEQFTAQFNPARLDRS
MAQQSQLSGQMNAKQREVDEAITKVTQRLEEMKRVVADGQKNVKQVNALLEKCAKKTDKL
QAETKSQFPIEYAQAGEKYSDH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG