YALI0E29557g

Overview

Description some similarities with uniprot|Q05080 Saccharomyces cerevisiae YMR032w HOF1 involved in cytokinesis
Locus type CDS
Locus tag YALI0E29557g

Location

Species Yarrowia lipolytica Positions 3501160..3503809
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2650 (nuc.)
Previous locus YALI0E29535g Next locus YALI0E29579g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29557g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29557gYALI0E29557g_mRNA-001YALI0E29557g_CDS-001

Nucleotide sequence

 

>YALI0E29557g
ATGTCGGAACATTCGTTTGCCAACAACTTTTGGGGCAAGGATGACCAGGGAGTTCACAAT
GTTTTTCTTCGCATGAAGAACTCCAAACAAACCAATGAAGAAGTACGTCTATTCTACAAG
GAGCGAATCGCCATTGAAGAGGAGTATTCTAAACGCATGCTGGCTCTGTCTCGAAAGAGC
TTGGGAGCTGTCGAGACAGGCAGTCTCCAGTCTTGTCTTGAGACCATCAGACAGGACACT
GAAGCCATGGGCAAATCTCACGCCACTGCTGCTCAGCAACTCAAGAGCCAGCTGGAGGAG
CCTCTGGTAGCCTTCAACAGCAGCATGCGGGAGCGACGCAAGACAACGCAGCAGACGGTG
GAGAAACTGCTCAAGGCCAAGATCATGCAAAACAACAACGTGGAGAAGGCCCGTGAGAAG
TTTGAGTTGGACTGCAACAAAATTAATGGGTACTATGCCCAGCAAAACCTGCTGATGGGC
AAGGAGCTGGAGAAGAACAATCAGAAACTCGACAAGACTCACATGAGTGTCAACGCCACC
AAGCGGGACTACCAGACCCATCTTCGAAACCTCGCTGATATTATTGATCGATGGAACAAG
GAATGGAAGGTGGCCTGTGACAAACTGCAGGATATTGAGGAGGAGAGAATCAACTTTCTC
AAAAGCAACCTGTGGGGATATACTAATATCGTCTCTACAGTGTGTGTCTCTGACGATGAG
TGCTGTGAAAACATTCGTCTGGCCTTGGAGAAGACAGACGTCAACGAGGATATTATGCAG
TTTGTGAGAGATAACTCCACTGGTGCCGAAATTCAGGATCCCCCGGAGTTCATCAACTTC
TTAAACGGACACTCTCATGATAATGTTGAGAACAGCTTCAAGGTGGCCCAGTTCCCTCGA
ATTGCTGGTACTGGAGACGAGTCTATGGACGATATGATGAACTCATCAATTGGAGCAGCT
GGTTCACATGTTATGGATCCCGACACTTCGTTTGGATCTCTGGAACAGGCTATTCCTGAT
CCCAAGCCAGCTCATCATTCTCCTCTTCACAACATTGCTCAGACTGCCCGAGATGTCTTC
TCGTTTAAGCTTGGGGCTCCATCTTCTACTGCGCCTGCCGCATCTGAGGTTGGCTCTTCT
GTCTATTCTGAGCCTGACTGGGCTGGATCGTCAGTAAACGAGCCCTCTTCTGTCATGGAG
CCCTCTGGCCGTACGGAAGGACGATCTTGGGCTACTCCTTTCCGAAGACGGTCCAAGAAG
GATCTGAACAAGGGCTGGAACCGAAGCCAGTCTCGAGACCCTGCCGAGGAGCGTGCCCGA
ACTCCAAACCCTCGGTCTCGAACCCCTTACGACTCTAACGAGACTCATGAGGCTTTGTCT
GTTGGAGCTAACACATTTGACTTGAGCCCTTCGAAGTCTCCTGCTCCTCAGCGAGCTGCC
ATGGCTTCATCGCCTGCTCCTCCATCCACGATGAATAGTGCCTCCTCTCAGAATGTCAAG
AAGCTGTCCCGAGACGATCCTCTTGTTGCTGCCCTTGAACAGCTCAAATTGTCTGTGGGG
TCGAGCTCCTCCGTGGGTTCTTCAGTGTCCTCCGCACCCAACACTGAGCCTCATAGCTCC
AAGTACGGTACTCTTGGAAGTGGCCAGCCCATTTCTCAGCGACGGGTGGCTTCTCGATCA
GCACCCTCATCTCCTGGCCGGTCTTTTGAGCCCTCCTACCTCAATGCTCCTGCCCCTGCA
TTCACAGCTCGAGACATGCAGCAGACTAGTCAGCAGTACGCTGCTAACATGTTTGGTGAG
GGACACTCTCGGGACTCTGGAGGAGCAACCCGTGAGCCTGTGCATCGCAAACCCGTCCAG
CGAACGCCTGAGCGAGGACGAGCACCTCGATCTGACCAGCCCAGACCGAAGAGCTATTAC
GAGGGAGCTTCCGCCGAACAGATCCAGAGACAGCTCTATGCCGAACAGGGCCAGCGAGCT
CATTCCCCCTCCATTGTGGGAGACAACCACTACCCTCGTACTGTTTCTCCCGATCCTCAG
CTGAGAAGTGTCTCTCCCAACCCTGCTGCTCGACCTGGTAGTGCCAACCCTTATTCTGAA
CCTCTACATGGTCGATCTCAGCCAAACCTGTATGCCGCTTCAGGTCAACAGCGACCTCAG
CGAAGCCACACACCTAACGGGCGATCCTACGATCTCTACGGAGCTCAGCAGCAGCAGCAG
CAGCAATACCACCTGCATGCCCAGCAGCAACAACAACAGCAATACCAAGATAGTCGTCCT
AGATCCAAGTCCATGGGTGAGCCTCGAGTGGATCCCCGAATGGACCCTAGATTTAACCCA
GATCCCCGAATGTCATCTCCTCGAGGCGCACCACAGCTCCCACGAGTCTCTTCGGATGGA
CGGCCAGTTATATCTTATTCCAGAGCGCAGTACGACTACCGAGCTGCCATAGCTGAGGAG
GTGTCGTTCCGAAAGGGCGAAGTGATGCTGGTACTGCGAATGCAGGACGATGGCTGGTGG
GAAGTGGAGGTCTACGGACGAGGCCAGCGAACTGGTCTAGCTCCCAGCAACTTTTTGGCT
GACATTTAGACGATGGAGCTCTGTTATTTATGTATGTATAGGTTGGTGTAATTTAAGGAC
TTTGTATAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29557g_CDS-001

Protein length: 863 aa.
Product: Conserved hypothetical protein

>YALI0E29557g_CDS-001 MSEHSFANNFWGKDDQGVHNVFLRMKNSKQTNEEVRLFYKERIAIEEEYSKRMLALSRKS
LGAVETGSLQSCLETIRQDTEAMGKSHATAAQQLKSQLEEPLVAFNSSMRERRKTTQQTV
EKLLKAKIMQNNNVEKAREKFELDCNKINGYYAQQNLLMGKELEKNNQKLDKTHMSVNAT
KRDYQTHLRNLADIIDRWNKEWKVACDKLQDIEEERINFLKSNLWGYTNIVSTVCVSDDE
CCENIRLALEKTDVNEDIMQFVRDNSTGAEIQDPPEFINFLNGHSHDNVENSFKVAQFPR
IAGTGDESMDDMMNSSIGAAGSHVMDPDTSFGSLEQAIPDPKPAHHSPLHNIAQTARDVF
SFKLGAPSSTAPAASEVGSSVYSEPDWAGSSVNEPSSVMEPSGRTEGRSWATPFRRRSKK
DLNKGWNRSQSRDPAEERARTPNPRSRTPYDSNETHEALSVGANTFDLSPSKSPAPQRAA
MASSPAPPSTMNSASSQNVKKLSRDDPLVAALEQLKLSVGSSSSVGSSVSSAPNTEPHSS
KYGTLGSGQPISQRRVASRSAPSSPGRSFEPSYLNAPAPAFTARDMQQTSQQYAANMFGE
GHSRDSGGATREPVHRKPVQRTPERGRAPRSDQPRPKSYYEGASAEQIQRQLYAEQGQRA
HSPSIVGDNHYPRTVSPDPQLRSVSPNPAARPGSANPYSEPLHGRSQPNLYAASGQQRPQ
RSHTPNGRSYDLYGAQQQQQQQYHLHAQQQQQQQYQDSRPRSKSMGEPRVDPRMDPRFNP
DPRMSSPRGAPQLPRVSSDGRPVISYSRAQYDYRAAIAEEVSFRKGEVMLVLRMQDDGWW
EVEVYGRGQRTGLAPSNFLADI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG