YALI0E29535g

Overview

Description weakly similar to uniprot|Q7S6G6 Neurospora crassa NCU04740
Locus type CDS
Locus tag YALI0E29535g

Location

Species Yarrowia lipolytica Positions 3500122..3501118
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 997 (nuc.)
Previous locus YALI0E29506g Next locus YALI0E29557g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29535g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29535gYALI0E29535g_mRNA-001YALI0E29535g_CDS-001

Nucleotide sequence

 

>YALI0E29535g
ATGATGCATGAGCAATGTGATGAAGCGAAATCGAAGCGTAACCTGATACCAAAACAGTCT
ACGCTACAATACATAACCATGACCAGCACTCTGAGCACGACCAAGAACCACCTGGTGATT
CTGCCACCAACCACAAAACCAACAATTGTGTCGTTGACACACCCTCGAACCAGAAACCTG
GCTCGATTCGTCGTTGACTCCTCCGACCCCAAGCACACTAAGGTATACGAAATCACCCAG
ATCAACGGCTCCAATGCGCACTTCGAGGGCACACCTGATCCCCGAAGCATCATTTTACAA
GTCGAGGGTGACAAGGGAAGTGTGATTCAGGATCCCTCGGTCTTCATGACCACTCCCTTC
TCTCCACTATGGCTCATTCTACCCACTCTGGTGCGGCATAAGGACAAGCTGATGACTCTG
GACGACCTGCACGAGGCATCGTGCCACGGTGTCGACAGGATGGACTTAATCACTCAGGAC
ACGTTTGATAAGTACATCCCAGATGTGTGCGAGGTTATGGACGAGGGAGAGAAGTTCTAC
AAGCTGTCCAACGAGAAGTTGCTTGCTCACTTGAAGGCTATCGTCGCTAGCATCAAGAAG
AGCCTGCCCAACGATATTTATGTGCGACATGTACAGAACTTGCTCGACTCAGACGCATCA
GACGAGATCAAGGATCTCGCCAAAGAGCACATCTCCATGAACATGCTGGGTTCCAACCTA
CCGCCAGATGTCACCGAGATTTTGCTGAAAAGCGTCGATTTCGAGCCCTACAACAAGCAC
AAGGCCGAGTATAAGGCCAAGAGAGATGCTGAATCGGCTGCACAGGGTCCTTCCGGTCCC
CCTGAGAAGAAGCGGAAGAAATCTGCACCTGCCAAGGAAGAGAAGGCACCGAAAAATAAC
AAGCGACTTACTGCTTTCTTCTCTGTGGTGCCTAAGAAGTAGTAGGTAGAAGCGTTTTGT
CTTCTACTGTGTAAAAACATTGACATTAATTATTGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29535g_CDS-001

Protein length: 314 aa.
Product: Conserved hypothetical protein

>YALI0E29535g_CDS-001 MMHEQCDEAKSKRNLIPKQSTLQYITMTSTLSTTKNHLVILPPTTKPTIVSLTHPRTRNL
ARFVVDSSDPKHTKVYEITQINGSNAHFEGTPDPRSIILQVEGDKGSVIQDPSVFMTTPF
SPLWLILPTLVRHKDKLMTLDDLHEASCHGVDRMDLITQDTFDKYIPDVCEVMDEGEKFY
KLSNEKLLAHLKAIVASIKKSLPNDIYVRHVQNLLDSDASDEIKDLAKEHISMNMLGSNL
PPDVTEILLKSVDFEPYNKHKAEYKAKRDAESAAQGPSGPPEKKRKKSAPAKEEKAPKNN
KRLTAFFSVVPKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG