YALI0E29381g

Overview

Description weakly similar to uniprot|Q6C162 Yarrowia lipolytica YALI0F18920g
Locus type CDS
Locus tag YALI0E29381g

Location

Species Yarrowia lipolytica Positions 3478804..3480361
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1558 (nuc.)
Previous locus YALI0E29359g Next locus YALI0E29403g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29381g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29381gYALI0E29381g_mRNA-001YALI0E29381g_CDS-001

Nucleotide sequence

 

>YALI0E29381g
ATGCACACAACCCGGGGAAGTACTTCTCTGAAGCCCATCTCCGTCAAGGAGACGGCCAAA
AACATTGTGGACATTGTGGTGGACCCGGACTGTGCTAAGGATGTCTACGACCTAGGGGAT
CATGTCAAAGGCCACATCCTTGTGGAACCGAATTATCGGCACATTGCTTTCGATCAGCTG
CGACTTTTTTTTACCGGAACACAGTGGACTATTCATCGGCGGGCTGCACAACGTCAAAAG
GCCACTTATGTGTTTGTCAAGGAGGAATTACGCATGGATGAAGAATGCTTAGACACAGCT
AATGGAGAAATAGTTCCTGCGTTGCCACCGACCGATCCGGGGGAGTTCCGAATAGGACAA
AAATACAGATACAAGTTCGAGTTTCATATACCTGGAGAAATTTCGGAGGCTCTGGACAAC
GGCATAGCTCTGACTAAACGACTACCACCGAGTATAGGAAGCAACTCCATGTTCGAAGAG
ACTCAAGGAGAAGATATCCCGGGAAAGGTTGGTGGTATTCAATATGAGGTGAGGTTTCAG
ATCATGGCTGAAATCACCATGCGATTCTATCTCTATATTAAGGTCATCCCCGCATACCCA
GCTGCCGTACATTCTCTCAACACAAAGTTCTTCTTGGAACCACAACCTTCGACATTTATT
GCAGAGCGCAAGTTTGGAGGAGGGTTCTTGAAAAAGAAGCCAATGACGTATGTGAAGATG
GGTATCAACACAACACCGAGTATCGTGGCTGGAGGAGCACCTACTCTGTACCTTGTTCAT
GTCTTGTCAGACAAGCCTCAGGTTCTCAAAAAGGCTTGGGCCACTGTCGAAGGTATTACT
TACTGTTCTCTGTCAGGAATGCAGTTTATCCCCTCAGACTTACTGGTGAAGCGTTACTCT
GATGTGCAAAGGATAGAAGAGATCATTCAAAGAAGTATGGTGGATCTGAAGATTGATTGG
AATGACTCTGACTCGTCTGACTCGGATTACCCCTACTGTTCGGCTGTTCTCGAGATTCCA
GTATCAGCATCAAAAACCATTATCCCTTCATTCTATTCAGCTCTCATTTCGCGTCAATAT
CTCGTGCGCTTTGATTTGGAGTTCGAGGTTGGAACAATGTCTTTGACTGTTCCAGTAGAG
ATCACCAAGCACAACAACAGAGACTACATGGCCAAGCTAGATAAAATGAAGGCTGACACG
GGACGGTTTGTGGGGGATTTCGTGCCTGCATACTCTGCCCAGGACCCTCGAGGAGAAATC
ACACGAACAGAAAGCCTGAGAAGCGTCATCTTGTCGCCCGAAAAGGATCTTGAAAAACAG
ATCGTAGAACAACAACGATACAAGACATTGGTGGAAAGAAGCAGCATATCCTCAACACCA
GCCTCAGCAAAGTCTAGCCATGTCAATTTATACTCCTTGAATGGTCACCCCGGGGTACAA
GCTTCACCACTGTCTGCTCCTATGTGATAAACATAGTGAAGTAGCTACTAAGTACAATTA
GAATACAGGACGTTTTTGGGCTATAAATAATATATAAGATACTAAGTACAATACAAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29381g_CDS-001

Protein length: 489 aa.
Product: Conserved hypothetical protein

>YALI0E29381g_CDS-001 MHTTRGSTSLKPISVKETAKNIVDIVVDPDCAKDVYDLGDHVKGHILVEPNYRHIAFDQL
RLFFTGTQWTIHRRAAQRQKATYVFVKEELRMDEECLDTANGEIVPALPPTDPGEFRIGQ
KYRYKFEFHIPGEISEALDNGIALTKRLPPSIGSNSMFEETQGEDIPGKVGGIQYEVRFQ
IMAEITMRFYLYIKVIPAYPAAVHSLNTKFFLEPQPSTFIAERKFGGGFLKKKPMTYVKM
GINTTPSIVAGGAPTLYLVHVLSDKPQVLKKAWATVEGITYCSLSGMQFIPSDLLVKRYS
DVQRIEEIIQRSMVDLKIDWNDSDSSDSDYPYCSAVLEIPVSASKTIIPSFYSALISRQY
LVRFDLEFEVGTMSLTVPVEITKHNNRDYMAKLDKMKADTGRFVGDFVPAYSAQDPRGEI
TRTESLRSVILSPEKDLEKQIVEQQRYKTLVERSSISSTPASAKSSHVNLYSLNGHPGVQ
ASPLSAPM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG