YALI0E29337g

Overview

Description similar to uniprot|P38932 Saccharomyces cerevisiae YGL095c VPS45 vacuolar protein sorting-associated protein
Locus type CDS
Locus tag YALI0E29337g

Location

Species Yarrowia lipolytica Positions 3474956..3476717
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1762 (nuc.)
Previous locus YALI0E29315g Next locus YALI0E29359g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29337g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29337gYALI0E29337g_mRNA-001YALI0E29337g_CDS-001

Nucleotide sequence

 

>YALI0E29337g
ATGAACGTCACGGAAACTGGTAAGGAATACATTACCACAATGGTCGGGGACAAGTCTGGC
AAGCTCAAGGTGTTGCTGCTAGACGGGGAAACTACCCCTATAGTTTCCATGTGCACAACC
CAATCGTCTCTACTTCAAAATGAAGTCTACCTGATAGACCGAATCGACAACCCCAATCGA
GAGAAACAACGACATTTGGCGTGCATTGTGTTTATCCGGCCCAGCAACGACTCCATTGCC
AAGCTGTGTGAAGAGCTGCGGAACCCTCGATATGCCTCTTACGAGCTCTACTTCTCCAAC
GTGGTCAAAAAGTCGCAGCTGGAACGACTGGCTGAAAGTGACGACTATGAGGTGGTCAAA
AAGGTGCAGGAGAGCTTTGCTGACTTCCTGGCCGTTAACAAGGATCTCTTCAACTTTTCT
CTCACCAGAAACTCGCTCTCCATCTACTCCGACGGAGGGTGGAACCCCGAATGTCTCAAC
AGATGCACAGAGTCATTGCAGGCTGTGCTGCTGGGTCTCAAACTGCGACCTCAGATCCGA
TACGACGCCAATTCCAATATGGCTCGAAAACTTGCCGAAGAACTGGCCTACGGCATCAAG
CAGGAAGAGAACCTGTTCAACTTCAAAACTCCCAGGGACTCGGCGCCCGTCCTGCTTATT
CTGGACAGAAAGAACGATCCCCTCACGCCTCTATTGACGCCCTGGAGTTACCAAGCCATG
GTCCACGAATTCATCGGTATCGATAACAACCGAGTGGATCTCCGTAACACGCCTGAGATT
CGAGACGAGCTCAAAGAAATTGTTCTTTCTCAAAATGATGATCCTTTCTTCGCTGACAAC
ATGTACCATAACTTCGGAGACCTGGGCCAATCCATCAAGGATTATGTGTCGCACTATCAG
TCTAAGACACAATCAAACATGGACATTGAAAGTATCGCCGACATGAAGCGATTTGTGGAG
GAGTACCCCGAGTTCCGACGACTCTCAGGTAACGTTTCCAAACACGTTACTCTTGTGGGA
GAGCTCTCTCGAATTGTCGAGAAAGGCCAGCATCTGGACGTCTCCGAATTGGAACAAACC
CTTGTGTGCTCCGACTCCCACAATGACTCTCTCAAACAGATTCAGCAAATAATCGCAGCG
CCCTCCATCTCCATGGAGAACAAAGTGCGCCTGGTTGCTCTTTACGGTCTGCGATACGAG
CAAAAGGACAACAACTCTCTCAAGCTCCTGTGTGAGATGCTAGGACAGTATGAGGGACAA
GACGCAGTGCAGGCGGCTCAGGCAGTCATTAATTTCGCATGCCTCGCCCAGAGACAAGAG
GCTCTCTTTGAAGAAGGTTTCATCGCCAAGGCCAAGGGAAACATCATGGGTCTTAAGGGT
ATTCAGAACGTGTACACTCAACATCGGCCCTTGTTAGAGAAAACCTTGACCAATCTTGTC
AAGAACAAGCTGCGTGAGGCTACACACCCCTATGTACGGGGAGCAGGCCGGGGCCCAGTT
TCCAATAATGGAGTCTATGAGGATGACGTGCAGGAGGTAGTGGTTTTCATTGTCGGCGGA
GTCACGTATGAGGAGGCTCGTCTTATTGCCGAAATTAATTCCCAGTCGTCTGTCCGTATT
GTTCTTGGGGGCACTTCCATTGTCAACTCTGGCGAGTTTATTCAGGAGTGTTTGGACCAG
AACCACAGAGGACTCTTGCGTGGCGCAGACCCCGAAACCCGACTTAGGCAGCTGATATAA
TTTATATTATTTTATGATTGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29337g_CDS-001

Protein length: 580 aa.
Product: Protein of the Sec1p/Munc-18 family, putative

>YALI0E29337g_CDS-001 MNVTETGKEYITTMVGDKSGKLKVLLLDGETTPIVSMCTTQSSLLQNEVYLIDRIDNPNR
EKQRHLACIVFIRPSNDSIAKLCEELRNPRYASYELYFSNVVKKSQLERLAESDDYEVVK
KVQESFADFLAVNKDLFNFSLTRNSLSIYSDGGWNPECLNRCTESLQAVLLGLKLRPQIR
YDANSNMARKLAEELAYGIKQEENLFNFKTPRDSAPVLLILDRKNDPLTPLLTPWSYQAM
VHEFIGIDNNRVDLRNTPEIRDELKEIVLSQNDDPFFADNMYHNFGDLGQSIKDYVSHYQ
SKTQSNMDIESIADMKRFVEEYPEFRRLSGNVSKHVTLVGELSRIVEKGQHLDVSELEQT
LVCSDSHNDSLKQIQQIIAAPSISMENKVRLVALYGLRYEQKDNNSLKLLCEMLGQYEGQ
DAVQAAQAVINFACLAQRQEALFEEGFIAKAKGNIMGLKGIQNVYTQHRPLLEKTLTNLV
KNKLREATHPYVRGAGRGPVSNNGVYEDDVQEVVVFIVGGVTYEEARLIAEINSQSSVRI
VLGGTSIVNSGEFIQECLDQNHRGLLRGADPETRLRQLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG