YALI0E29139g

Overview

Description similar to uniprot|P48527 Saccharomyces cerevisiae YPL097W MSY1 Mitochondrial tyrosyl-tRNA synthetase
Locus type CDS
Locus tag YALI0E29139g

Location

Species Yarrowia lipolytica Positions 3446664..3448302
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1639 (nuc.)
Previous locus YALI0E29117g Next locus YALI0E29161g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29139g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29139gYALI0E29139g_mRNA-001YALI0E29139g_CDS-001

Nucleotide sequence

 

>YALI0E29139g
ATGCTCCGTCTGCGACTGGTGAGAAACTTCACGTCCAAGGCCGGTCGGATCTCGTCGACC
GGCACTGCTAACGTGTTCCGTAACGAACCAAAACCCGCCAATCTCCAAAAATCCGCCCGC
GATGAAGCTGGATTCTCGTCCTCAGACTCTGCTCCCTCGTTGCTACAGTACCTCAAAGAC
CGGAACTTGGTTGCCAATGTGACCGAGGACTCGCTTGAGCAGCAACTACAGCAGAAATTC
ACATCCTTCTACCTTGGCATTGACCCCTCGGGCCCCTCCATGCACCTGGGGCACATGGTG
CCCGTCATGATCATGCTGCATCTCTTCCTCCGAGGCCACTACGCCTTTGCTCTGGTCGGA
GGAGCTACCGGAGCTGTGGGAGATCCCACTGGAAAGACTGAGGAGCGAAAGACGGTTGTG
AAGGATACTCTGCAATATAACCTCGACGCCCTGGCCACCTCCCTTGAGCGAACCTTTTTG
CATGCTGTTGCCGCTGCAAAGAAGGAAGGCGTCTATTACGGCGACCAGATCAAGCTGCAA
TACGCAATTGTCAATAACCACGACTGGTGGAAGAATGTCGGCTTCCTCGAGTTTCTGGCC
TCCTATGGACGACTCATCCGTGTCAATCAAATGATGGCCAGAGACTCCGTCAAAGACAGA
CTCAACTCGGCCACCGGCATTGGCTATAACGAGTTCTCCTACCAGATTCTGCAAGCCTTT
GATTTCTGGCACCTGTTCGAGACCCAGGGGTGCTCTCTTCAACTCGGTGGAGGAGACCAG
TGGGGAAACATCACTGCTGGGGTTGATCTGACTAAGCGAGCTGCTGCCGTCAACAACCTT
AAGGAAACTCCCTACGGAATCACTACTCAGCTCATGCTGTCCAAGAGCGGAAAGAAGCTG
GGGAAGTCGGAAAACAATGCCACCATCTGGCTCAACCCCGAGATGACCCGTCCTTTTGAG
TTGTACCAGTACCTGCTCAAGACTGCGGATGAGGATGTGGAGCAGTATCTTAAAATGTTT
ACTTTCGTGTCGCTGGAAGACATTGCTACCATCATGAGACAGCATGCGGAGAACGAGTCT
CTGCGATATGCCCAGCGAGTACTAGCCGACAAATTCACAGCCCTTATCCACGGAGATACT
GTTGTTGGGCGATGCCAGGTCATCACCCGAATCATGTTTGCTAAGTCGTCTCTGGAGCTC
AACCAACAACCAAAGCCCGCTGCTCTTACTAACTCCGAGTCTTTGAAACAAGTTCTTGCC
GAGGAGGGACTGCTCAAGCCTCTTGACAAGTCTACAGACTACACCACTCTGGTATCTACA
CACTTCAACATGTCCAAGAGTGCAGCGAAGAAGCTTATCTCCAACAAGGGTGTTTCTGTG
GGTCTTGAGGGTGCTCAGAAGGTTGAGATCGGACCTATTCTTGAAAAACACAAGGACATG
GGTGACTTCTTGATTGTCCGAGTCGGCAAGCTTGTTCAACCATTCTACCTTGGATCTGAC
CCTGTGGAGACTATTCCCTCTGCTGTCGGCATTTCTGACTCTTATGAGGTTCACACCGAG
GACATTGATGTCACTCGAAAGTAGAACACCTGTAAATAATTGTACATAATACATAATACT
GTATATCATTAACATATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29139g_CDS-001

Protein length: 528 aa.
Product: Mitochondrial tyrosyl-tRNA synthetase, putative

>YALI0E29139g_CDS-001 MLRLRLVRNFTSKAGRISSTGTANVFRNEPKPANLQKSARDEAGFSSSDSAPSLLQYLKD
RNLVANVTEDSLEQQLQQKFTSFYLGIDPSGPSMHLGHMVPVMIMLHLFLRGHYAFALVG
GATGAVGDPTGKTEERKTVVKDTLQYNLDALATSLERTFLHAVAAAKKEGVYYGDQIKLQ
YAIVNNHDWWKNVGFLEFLASYGRLIRVNQMMARDSVKDRLNSATGIGYNEFSYQILQAF
DFWHLFETQGCSLQLGGGDQWGNITAGVDLTKRAAAVNNLKETPYGITTQLMLSKSGKKL
GKSENNATIWLNPEMTRPFELYQYLLKTADEDVEQYLKMFTFVSLEDIATIMRQHAENES
LRYAQRVLADKFTALIHGDTVVGRCQVITRIMFAKSSLELNQQPKPAALTNSESLKQVLA
EEGLLKPLDKSTDYTTLVSTHFNMSKSAAKKLISNKGVSVGLEGAQKVEIGPILEKHKDM
GDFLIVRVGKLVQPFYLGSDPVETIPSAVGISDSYEVHTEDIDVTRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG