YALI0E29117g

Overview

Description weakly similar to uniprot|P35732 Saccharomyces cerevisiae YKL054c VID31 similarity to glutenin
Locus type CDS
Locus tag YALI0E29117g

Location

Species Yarrowia lipolytica Positions 3443945..3445627
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1683 (nuc.)
Previous locus YALI0E29095g Next locus YALI0E29139g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29117g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29117gYALI0E29117g_mRNA-001YALI0E29117g_CDS-001

Nucleotide sequence

 

>YALI0E29117g
ATGTCCAAGAAAGAGGACGGCACGGACCTCGACGCGCCCCACACTCCGCCCGCCGACAAA
CAGAGCTTCCTGCCCACCCCTCTTCCTAGCGGTCAGCCCTTTGAGCCCGAACATGAGCCC
ACAGTCACAGATGCAGACTCCACCCAAGATACCCAACCGGACGACTCTACCGAGCACAAG
GAGCAGCCTGAAGACAATGCCGATGTGTCGACGCCTCTAGCACGACCCATTTCAAGACCC
CAGACTCCCACCGAGGCCGACCCAGAGAAGGAGGCGCTCATTCGACACTGGAAGCCCCTC
AGTGAGGAGGAAATCGCGCAGGGAGGAGAACCGGTGGCAGAGTCACTGCGAGCAGCCAAC
GAGACTATTGAGGCTCTCACAGCTCTTCTGGCAAAGACCAAGATCCAGAAGTCGCACTTC
CAGCTACAGAACAAGCTACTGACCATTGAGACCCATGAAGCGGCCCAACGATACGAGGTG
GAGAACAACATCGCCAAGAGAGAGGTGGATAGACTGCGACTGGCAGATCAGGACGGCGAG
TCACCCCGTCAGCTGCTGGGAGAGTATAACAAGTCCAGCACCAAGGTGTTGGAGAGTTAC
AAGCGAAAGTTGCGACGGGCAAAGTTGAGGCTGGAGGATGCAGTGTTTGACATTGAGTGG
CGGGACCGCGAGATTCAACGACTGCGAGCTCGACTGGAGCCTGTTACGCCTCAGGCACAG
CAGCATCCCCACCAGCACCCCGCACACCTGTCGCAGCAGCCGCAACCCCTGCTGCAGCAC
CCTCATCAGCAACAACAGCAACCTCCACACATGCAGAGCCCCCACCACCCATCGTCTCTG
CAGTCATCGCCTGTTCTGCCGTATTTCCCGCAACATCAGCCCCAACCTCAGCAGCAACAG
CAGCAGCAGCAACATCACCCCATGTCACCTGTGGGTATGGTGCACAAGGGTATGGGACAC
CGACGAACACAGTCAGCTTATGAGAACCGCCAGCTGGACTCGCGGCCTCCCCCGCTGTCC
ATTGGTACCTCTCAGCCGCCTCGACAACACATTCAGCCACCTCAGTCGCAGCAACAACAG
GGCCAGAACCACAGAATGGATGCCCTTGGACTGCTGGCTTCCCAGGCACTGCATGAACAC
AATCGAAGGTCGCCAACCGAGCTTATGAGCCCAGTGGCGTTTCGAGGATCGAGACAATTA
CAGCCTCCACCAGCACACATAATGTCTAGTTCTCCTGTGGCCATTCCTTCGTCGCCTCTT
CGAGAAACCAAGGCCACAGAGCTGCCTCCCTCGTCACCAGAGAAACGACGACGAGGCTCT
TCTGCATCCACCATTTCTGCTCCTTCAGATGACGAGAACTTTGACTCGCAGCTCAACACT
ACTCCTGGCACTCCGTCACCAGTGCGGTCCAAGATCAGTCCCAAGAAGAAGCTTGCTCAG
GAGCGAGAGCTTGGGGCCAGTGGAGTCAACCGAGTCCTGGACTTTTCTCCCGCAGCATAA
GATGATAACGCCTCTAACATTAATCGGTGGTATGAGCAGACTGTACAAATACGGTGTGCC
AGTACCCCTCACAATCAAGTGGGCGTGCGTGTGTATAGTGCGCCCACATTCTAACGTATG
CCAGATTTATATATTTATTTATAGTGGCTTTTATTTAAATTCTTATTACATGGGATGATT
TAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29117g_CDS-001

Protein length: 500 aa.
Product: Conserved hypothetical protein

>YALI0E29117g_CDS-001 MSKKEDGTDLDAPHTPPADKQSFLPTPLPSGQPFEPEHEPTVTDADSTQDTQPDDSTEHK
EQPEDNADVSTPLARPISRPQTPTEADPEKEALIRHWKPLSEEEIAQGGEPVAESLRAAN
ETIEALTALLAKTKIQKSHFQLQNKLLTIETHEAAQRYEVENNIAKREVDRLRLADQDGE
SPRQLLGEYNKSSTKVLESYKRKLRRAKLRLEDAVFDIEWRDREIQRLRARLEPVTPQAQ
QHPHQHPAHLSQQPQPLLQHPHQQQQQPPHMQSPHHPSSLQSSPVLPYFPQHQPQPQQQQ
QQQQHHPMSPVGMVHKGMGHRRTQSAYENRQLDSRPPPLSIGTSQPPRQHIQPPQSQQQQ
GQNHRMDALGLLASQALHEHNRRSPTELMSPVAFRGSRQLQPPPAHIMSSSPVAIPSSPL
RETKATELPPSSPEKRRRGSSASTISAPSDDENFDSQLNTTPGTPSPVRSKISPKKKLAQ
ERELGASGVNRVLDFSPAA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG