YALI0E29007g

Overview

Description weakly similar to uniprot|P41812 Saccharomyces cerevisiae YNL221C POP1 Subunit of both RNase MRP and nuclear RNase P
Locus type CDS
Locus tag YALI0E29007g

Location

Species Yarrowia lipolytica Positions 3434853..3436972
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2120 (nuc.)
Previous locus YALI0E28985g Next locus YALI0E29029g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29007g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29007gYALI0E29007g_mRNA-001YALI0E29007g_CDS-001

Nucleotide sequence

 

>YALI0E29007g
ATGCAGTGTGGGAGAATACTTGTGAATTTTCACGTCGCTCTCAAACATCATAAGATGCCG
CCAAAAAAGAAGTCGAAGCTCTTCAATGCTCGGCGAATTATCGTCCAAAATACCGACGAT
GCTTTGAAGGACGGCCGAATTAACGTTCCGGCTTTCGTCAATGCTAGACAGCGAGAAATC
GAGAAACTCGCGACCGCCATGCAATCGTCGAGAACAGCAGCCTCTCAACGATCTTTCCAG
TCTCTACCTCGATCCCTGAGACGAAGAGCCGCCTCACATGATGTCAAGCGGATCCCAAAA
AGACTCAGAGCCCGAGCTCGTCAGGAAATGGCTAATGATGACCCCAGTTGTCATACCAGA
GCTGCCACAGGAAAGAACAAGATTGGAAAGCTGAGAGGGCATAAACGGCTGCTGGCGATC
CTGGACCAGAGAAAACACGTGGTTGGAGACAGACAAAAGAATGCTACTCCGATGGCCTTG
TTGCAACCTAAGGATGTCACTGGAAAGGATCAGACAGCTACCCCTCCAGTGGGAAAGCTG
CGATTCGAACATAGACAAAAGGATAAGACCTGGCTACCCACTCACGTGTGGCATGCGAAG
AGAGCACATTTTGAGAACCGATGGGGCTTCTCAATCCCAGAAAAGCCATCGCAAAAGTGC
TACAGAAAGACACACAGAGGAATAAAGCACGAAGGAGCTACAGTATGGGACTCTTCATAC
ACCGCTACGTTCAGAATCGAAGCTACCACTGAGTACCTAAAACAGCTCATGGCCGGCTGG
TTCGGCAAAAAGGTGCTTAGAAAACGCTATGTTTCAGGCGAATACTGCTTTTCTGGAGAA
ATCAAGCCCGAGGAGGTATCCCTAGGCCCTGCCCAGGTACTCTGGGAGTCTGAGTCTTCT
GTGATCCTCAGAGTTCACCCTTGCATGACCTCCATGGTTCTACCTCTGCTGAACAAGGAG
CGGCTGGAAAACGCCTCTCACAAGTTCCATTATACTGATCTGAGATACGCTATTGGATCG
ATCGGCATTGGCGGCCCCAAAGCTTTGCAGGTGCTCAACACAGTATTGTGCCCTTCCGAT
GAGCGAAGTTCTAGTGCCAAGATGTTCAGATCACTCTCTTACCTGGCCACACTTGACAGC
CTTCCTGAAAATGCCGTTATGAATCTGAGGGTGCATGACCCTCGTCTGCATCCTGCCAAG
CTCAAGCTACCTCGAACCAGCAACGAGCAGAGCATCATGGAGACTCTAATAGCCTGGCCA
GGAGCTTTAGTCGAGGAAAACAAAACTAACGGAAACTTCACCGTGTTCTCAGGGGAGGCG
CGACAAGAGAGTTATGCCAAACAGATGTCTCTCAAGGGCATCAACCAGCACAGAACTAAC
AAGCTGAGAGGACAAGAAGACGGAAAGACAAAGGCGGAGATACCTATCACCATTATTCGG
AATGGTGCACACCTCTCGATCCTTCTGCCCTGGTTCTGGGTTCTCCCTGTGTGGTTTGCT
CTTAATCACATCCCCTGTGTGTCATTTATTGGGTATCAGCAATTGCATCAGATTGCCTAT
GAAACTGGCAAGCCTTTTTTCCCCAACGATTACCCCCAGACCGAGGCCGGTCAGGCTGCC
GAGGTATTCAGAGGAATGGGGCTCGAGCAGAAATACAATCGAACCCCGCCTGCCAAGCGA
GTATCGTATTATGCTGAGCTTGGAAACGCCTTTGTGTGCGACTGGTCGCTGCTCAAGACA
AACGAGCAAGAGACCGACGTTGGAGTCGCCAACAATCTCAAGCGAGTCAGCGTTAAGTAT
CTGCACAGAGGAACTCCCTACGATCGAGCTCGCATCTATAGAATTCCTGAGGATAAGAAG
CAGCAGTGGCTCGATGCCCGAAAGCTGGACCCTGAGAATGTCGATGACTACCCAATTTGT
CCTTCTAGAGAGCATCTGATTGGCTTTGTGACTACTGGCGATGTCAATCTTCAGGAAGGA
TGTGGTTTCGGCATAGGTAGTGTTATCACCATCCCTGAGGACGATCTGGTGGTTGTTCGA
AACTGTGGACAAGGAGTCGGTCGGGTTGCTAAAATTGAACTGATTAAATAGATAATAAAT
ATATTGATGCATGTTTCTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29007g_CDS-001

Protein length: 697 aa.
Product: Conserved hypothetical protein

>YALI0E29007g_CDS-001 MQCGRILVNFHVALKHHKMPPKKKSKLFNARRIIVQNTDDALKDGRINVPAFVNARQREI
EKLATAMQSSRTAASQRSFQSLPRSLRRRAASHDVKRIPKRLRARARQEMANDDPSCHTR
AATGKNKIGKLRGHKRLLAILDQRKHVVGDRQKNATPMALLQPKDVTGKDQTATPPVGKL
RFEHRQKDKTWLPTHVWHAKRAHFENRWGFSIPEKPSQKCYRKTHRGIKHEGATVWDSSY
TATFRIEATTEYLKQLMAGWFGKKVLRKRYVSGEYCFSGEIKPEEVSLGPAQVLWESESS
VILRVHPCMTSMVLPLLNKERLENASHKFHYTDLRYAIGSIGIGGPKALQVLNTVLCPSD
ERSSSAKMFRSLSYLATLDSLPENAVMNLRVHDPRLHPAKLKLPRTSNEQSIMETLIAWP
GALVEENKTNGNFTVFSGEARQESYAKQMSLKGINQHRTNKLRGQEDGKTKAEIPITIIR
NGAHLSILLPWFWVLPVWFALNHIPCVSFIGYQQLHQIAYETGKPFFPNDYPQTEAGQAA
EVFRGMGLEQKYNRTPPAKRVSYYAELGNAFVCDWSLLKTNEQETDVGVANNLKRVSVKY
LHRGTPYDRARIYRIPEDKKQQWLDARKLDPENVDDYPICPSREHLIGFVTTGDVNLQEG
CGFGIGSVITIPEDDLVVVRNCGQGVGRVAKIELIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG