YALI0E28985g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E28985g

Location

Species Yarrowia lipolytica Positions 3433833..3434711
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 879 (nuc.)
Previous locus YALI0E28963g Next locus YALI0E29007g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28985g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28985gYALI0E28985g_mRNA-001YALI0E28985g_CDS-001

Nucleotide sequence

 

>YALI0E28985g
ATGGAACGCAGAGGACGATCCGGAAAGCACGAAGAGGTAGATATTACACAACTCGCCTCT
GTGGGGGCGACATCAGGGTCCTCCATGTCTAAACCCCCGAGCATAGCCAAGAAGACAGCC
GAGACCGTCGAATACATTGACCCCGAAGATCTGGAGCAAATCATGGGCCAAATGGGGTTT
GTGAAGGAGGGAGACGATAGATGGGAGCTGGTGGAACAGGTGGATGAGGATGAAGAGTGG
GACGAAGATGAGCAGTATGAGGAGGAATGCAGGGTGGCTCTGGAGAAACGAAACCAGCAG
CAACAAAGACAACAGCAGCACGCAGAACCAAAAGTCGACTTTCAGAACAGCAGGGAGTTT
ATGGAGGGTTCTGTGGGCTTTCTGACGCTACTGCTAGTTCTGTCAATGGTCGGGTTTCTT
ACGATTACGTTCGTTTTTGTGGAGAAGGAGTGGAAAGAGGGAGACTGGATACTGCTACCG
ATCTTGCCACTGGAGGCAGTTGGTGTGGTTTATGGCTGGTACAGGGGTGCCCGCGTTCAG
ACGGGACTTGTCCAGGTGTTGGGATTTGCATACAAGTTGAGACATCCTCTGCTGGCCGTG
TTGATGACTGTCTTTCTTCTCACCAACCAGGCTTGTCTCGCGGGCATTGTGCTGATTAAG
CGTAAGATCAGAGCTCAGTTTGGACCTGGATCTGGAGATAAGCAGAACCCTAAGAGTAGA
GAGGTCGATAAGAGCAAGGAGGAGGGGAGTGGGCCTGCTGAGGACTCCGATGAGGTCCCC
CAGCTCGTGAGCAGTTGATGCATGACAGGAGTGAGTGTATAAATATTTTCTATGTCCTGT
GGAGAGACGGTTTGTATAGTATTGATGTTTTTCGGACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28985g_CDS-001

Protein length: 266 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E28985g_CDS-001 MERRGRSGKHEEVDITQLASVGATSGSSMSKPPSIAKKTAETVEYIDPEDLEQIMGQMGF
VKEGDDRWELVEQVDEDEEWDEDEQYEEECRVALEKRNQQQQRQQQHAEPKVDFQNSREF
MEGSVGFLTLLLVLSMVGFLTITFVFVEKEWKEGDWILLPILPLEAVGVVYGWYRGARVQ
TGLVQVLGFAYKLRHPLLAVLMTVFLLTNQACLAGIVLIKRKIRAQFGPGSGDKQNPKSR
EVDKSKEEGSGPAEDSDEVPQLVSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG