YALI0E28831g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E28831g

Location

Species Yarrowia lipolytica Positions 3419684..3421475
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1792 (nuc.)
Previous locus YALI0E28809g Next locus YALI0E28853g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28831g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28831gYALI0E28831g_mRNA-001YALI0E28831g_CDS-001

Nucleotide sequence

 

>YALI0E28831g
ATGGCACGCAACCCCAGAAAACGCACTCGCGCCAGCAAGCAGACCGCATCCTCATGGACA
TCTCAGATCGCCCTTGATACTACAAGCCAAGACGTGGAAATCGACACAAAACATGAAGTG
TCTCAACCTGGGGAAAAAGTTCATGCAGGGTCTGACACAGAGCCTGACGCGGTCAAAATG
GAGAATGAATACGCCTCCAACAACACATCAGAGCCACCAGCCGCTGCCGCTGTGAAGCTA
GAGTCATCAGAAACTGTCATTGCATCAGATTCTTCCACACGAATGTCCTGGAGTGTGGCC
TCTTTCCCTGTGTTTGGAGACACAGAACTACCTCGCGCAGCTGCATTTACCTCCAAGACG
CCTCTACAAGAGATCTCAGACGCGTCTCTCAATGTCCAGGCTTTATCGCCGCATGTGAAG
CCTGAAGATGTCTTAGCGACCCCTGGAGTCAAGGGGGAATGTTATGACATATTCCAGTTT
CTGCATGAGGAGTACCAACCTGAAGCCGGTGCCCTGAATCTCGATCAACATCTATGGGGA
TACAGATCAGATCTCTCTGCTTCAGTTAGACTCCTCATGAGCTCAGACTCTGCTCGTCGC
CTCTCCAAGTTTTGCATTTCACTGGAAGGCGACGTGGAGATCTCGGGACCTACCACATTC
CCCATCTGCCTCATATCAGTAGACTCTAATGGGGTATATGGAGGCGTCCATCCCAGGGAG
GCTCTTCGAAAAAATCTTTTGGCAGATCACAAGTACAGATTCCAGCCCGTGTTTGCTATT
CCACGCGAGGAGTTCATGTTCCCCGGAGAGGAGTTCCTTAGGAGCTCTAAGATAGCTGAG
GATCTGGAGTATACAACAATTATCCTAAACCCTTACGAACACGGAGCCCTGGAGTCCGTC
ATCAGTATCAGTGGTTCATTGAATCACATTTCACGCATCATTCGGTTTTTCTGTGTGCGG
TCCAGAACTTCAGTTCTTCAGCTGTTGATCGGGAACTTGACCCACAACGAAAGGACTGAT
AGAGCCGCAGTATGTTGTTCCATTCGTCCTGGAGTCGAGATCGGAAAATGGTCGTTGCCT
GGATCCAACGAGTCCGTTGTTTCCATTCCCATCACTATTGGTTCCAGTGGCGATGGGAAT
AGATGGTCTATCGAGCCCAGACTTGATGCTATCGCCAAGCTTTGTTACCTCAACAACAAC
CCCCCCGTGGAGGACTTCAATTCCCAATACGAGCCTGTGATGCCGATCGTGGAATATGGT
GGTCTATGGACCAAGCCAGTATTTTGCTATGACTATCCAGATGCCATGGCCACTGAGAGT
GAGGGTGACGGTGAAGAAGAACAGCCTATCACTGGGTCTGAGATTGGCAGTGAGTTCTTT
ACCCCCGACTCAGTGTTGGAGAGGAGCGTTTACCAGACCGATATTGTTCTTCCTCGCTTT
AATCAGAAGACACAGCTGATCCACGGAGAGGTCAAGCGGCTGTCTGAAAAGCTGGGAATC
ACCACTAGAACCTCTAATGTCAACTCGGGTCTCATCACCGGGACCAGGGTTGATCTTGCT
GGCGACAGGGATAAGGTCCAGAAGCTCGTTGACACAGTTCGGGATATCGCTCAGTCCTGA
GTTGAGAGCGAAGAGTATGGTAATTACCACACAGCTTACAGTTGCGAACTAGCTTGAACG
TGTACAGTATATAGCGCATTATTTATTCAAATTCATCTATACTACATATAGTATGTGATC
TTCATCATTCAATTTATTCATTAATTTTATTTGTCGTTAGTGGTAGTATCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28831g_CDS-001

Protein length: 540 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E28831g_CDS-001 MARNPRKRTRASKQTASSWTSQIALDTTSQDVEIDTKHEVSQPGEKVHAGSDTEPDAVKM
ENEYASNNTSEPPAAAAVKLESSETVIASDSSTRMSWSVASFPVFGDTELPRAAAFTSKT
PLQEISDASLNVQALSPHVKPEDVLATPGVKGECYDIFQFLHEEYQPEAGALNLDQHLWG
YRSDLSASVRLLMSSDSARRLSKFCISLEGDVEISGPTTFPICLISVDSNGVYGGVHPRE
ALRKNLLADHKYRFQPVFAIPREEFMFPGEEFLRSSKIAEDLEYTTIILNPYEHGALESV
ISISGSLNHISRIIRFFCVRSRTSVLQLLIGNLTHNERTDRAAVCCSIRPGVEIGKWSLP
GSNESVVSIPITIGSSGDGNRWSIEPRLDAIAKLCYLNNNPPVEDFNSQYEPVMPIVEYG
GLWTKPVFCYDYPDAMATESEGDGEEEQPITGSEIGSEFFTPDSVLERSVYQTDIVLPRF
NQKTQLIHGEVKRLSEKLGITTRTSNVNSGLITGTRVDLAGDRDKVQKLVDTVRDIAQS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG