YALI0E28809g

Overview

Description similar to uniprot|I2JRS6 Dekkera bruxellensis AWRI1499_4424 Putative zinc ring finger protein
Locus type CDS
Locus tag YALI0E28809g

Location

Species Yarrowia lipolytica Positions 3417492..3419741
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2250 (nuc.)
Previous locus YALI0E28798r Next locus YALI0E28831g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28809g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28809gYALI0E28809g_mRNA-001YALI0E28809g_CDS-001

Nucleotide sequence

 

>YALI0E28809g
ATGAAGTTTGCCAAGAAGCTACAACAGACTCTGGAGGAGGAAGACATTCCCCAGGAGTGG
CGAACTGCTGCCATCCAGTACAAGGCCCTGAAAAAATGCATCACTAAGGTCGTCAACGAG
CTCGAGGAGTACGGTTTGGAAAAGGAGACCCTCGAGATGCTGCTACAATATCACCAAGCC
CAGCAAGACAAGGATAAGCTACATGAGGAGAAGGAGGAGACCAAGGAGATTCAGTCGTCG
GACCCGGCTATCGTCTACTCGTTCGAGGGCGATCTTCGAGAGTTCGTTCCCACCATTACA
ATAACCCTAGACAAGGATAAGAACATTCCCATGGCTGCCAAGCTGTCTTCTTCGACACGA
AAGAAGCTCAACCGAATCCTGCACTCCGACAAGTCCATTCAGGTTGTGGACAGATCAAAG
TCCGTGATTAAGCACGTGGACTCCGATGAAGAAGAGCTGGAGGACGCCGCCGATCTGGAA
ATGGAGCTGGACAACGATGAGGCCAGTCTCAGCGACTCCTCTGCCAAGAAAGGTGGGGAA
CGACGAAGATCTGCACAAAATATCTCCAACTATCTTAAGACGAGGAAGTCCTCGGCCCAG
CCTATTCCCGTCGTCAAAACCAACAACGACATGGAAACTCGTCCATTGATGAGGGTCAAT
TCCGTGGGATCTATTGATTCGGACAGGTCCACGTTTTCGCAATCCTCACTCATTTGGAAC
GGAGACATGTCAGACGGCATATACGAAAGCGACGACGGATTCGGGAGACGACCCAGTTAT
GCGAGCAGCGTTTTTTCTCAGGCAGACTCGCGACAGGGCTCGAGATCTGGTTCTATGTAC
AACTTTGAGTCTGTTTCCAGCAGACCTACTTCTATCAAGAATTATGAGTCAAGTGCAACA
GTGGGTGACTCACGGCGACCTAAAGACGTGCCTCAGTTTCAGGAGAGATTCACTCTGGCT
GTTCCCACATATAACGGCTCAAATAGAATACTTGCCGCTAGTCCTACGAGCCCCACCACC
AACACCAGCGGCTCTTCTTTGCATATCTCTCCTGGAACCTCTCCTACTGCCACTACAAAG
AGTCCTCCTGCTGCAGTATCCCCTGGAACCTCTCCCACCCACACAATCCACCAGATCCAG
TCTATGGTGGAACCTACTCCCACCCCTGCTCCCAAGCCGCGCTCCCAATCTTTTGCATCT
ACCGCTCCCTCTGTGGCCACAACTACCCCCATCTCTCCACGACTCATGTACACCGAGGAC
GGCCCCAAAATGGTCATCCAGCTGCAGTCGGACTCGGAGTTCTTCCACATGCTCATGAAA
GAGTTGCAGGATCTCGATGATCTCAAATCGTCACTCAAAAAGACTTTTGAAGCCGAAGTG
CTCGACCTAGCCAAGGAAATCTCCACAGTCGCTTCGCCAGGAACAAAGAAATCGGACATG
TATAGATGGAGACAAATCTTCCAGCTGTACATTGAGGCGGGCATCTTCTTTTCGGACCAC
GAGGCAATGGCAGGACCCACAAATTCCGTTCAGGCCAAAGAACGTCTCCAGTGGTTCTGG
GATCAGCTGCAGAAGCAGTCGCTTGTTACAGGTTTCAAGAACAAGCGATCCAGGAAGGCT
TTTGTCGACTTCTGGAACCTCAACTCGGAACTGGTCAAGAACCACGTCTACCAGGAACTC
AACCAGACTGCGATCACGAAGATTCTCAAGAAGTTCGACAAGCAAACCGCACTCACTTCG
AGACAATCTTTCCCTCCTTTCATTGCTGCTGGTCCCAATGGAACAGCATCTTTAGCCAAG
ACGATGATGTACGTCATGTCTGAACGACTCCTGTCCATCGTACCCCAGATTGACGACTAC
CTCTGTCCGATCTGCTCATCTATTGCAGTCAAGCCTATCAGACTATCGTGTAACCATGTC
TTTTGTGTGCGATGTCTGGTGAAGTTGCAGCGAAAGGGAGAAGACCGATGCCCTCTCTGT
CGAGAACTCAACGTGCTGGAGGCTGATGAGTCCAACCTGGATGAAGCCCACCTTAAGTAC
CTCAAGCTGTACTTCCCTAAGGAAGCGAAGGCAAAACAAATCGAGAACGAAAAGGAGATA
ACTGCCGAACAGTTTCAGAACATCAACAACGCGAAGTGCGTCATCATGTAACATACAGTA
CTACCCAATCATACGTGCTCCTTTTTTATTTAATGATACTACCACTAACGACAAATAAAA
TTAATGAATAAATTGAATGATGAAGATCAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28809g_CDS-001

Protein length: 717 aa.
Product: Conserved hypothetical protein

>YALI0E28809g_CDS-001 MKFAKKLQQTLEEEDIPQEWRTAAIQYKALKKCITKVVNELEEYGLEKETLEMLLQYHQA
QQDKDKLHEEKEETKEIQSSDPAIVYSFEGDLREFVPTITITLDKDKNIPMAAKLSSSTR
KKLNRILHSDKSIQVVDRSKSVIKHVDSDEEELEDAADLEMELDNDEASLSDSSAKKGGE
RRRSAQNISNYLKTRKSSAQPIPVVKTNNDMETRPLMRVNSVGSIDSDRSTFSQSSLIWN
GDMSDGIYESDDGFGRRPSYASSVFSQADSRQGSRSGSMYNFESVSSRPTSIKNYESSAT
VGDSRRPKDVPQFQERFTLAVPTYNGSNRILAASPTSPTTNTSGSSLHISPGTSPTATTK
SPPAAVSPGTSPTHTIHQIQSMVEPTPTPAPKPRSQSFASTAPSVATTTPISPRLMYTED
GPKMVIQLQSDSEFFHMLMKELQDLDDLKSSLKKTFEAEVLDLAKEISTVASPGTKKSDM
YRWRQIFQLYIEAGIFFSDHEAMAGPTNSVQAKERLQWFWDQLQKQSLVTGFKNKRSRKA
FVDFWNLNSELVKNHVYQELNQTAITKILKKFDKQTALTSRQSFPPFIAAGPNGTASLAK
TMMYVMSERLLSIVPQIDDYLCPICSSIAVKPIRLSCNHVFCVRCLVKLQRKGEDRCPLC
RELNVLEADESNLDEAHLKYLKLYFPKEAKAKQIENEKEITAEQFQNINNAKCVIM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG