YALI0E28666g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E28666g

Location

Species Yarrowia lipolytica Positions 3400170..3405271
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 5102 (nuc.)
Previous locus YALI0E28644g Next locus YALI0E28694r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28666g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28666gYALI0E28666g_mRNA-001YALI0E28666g_CDS-001

Nucleotide sequence

 

>YALI0E28666g
ATGGAGTATGTCATTCGCGACATGGAGTACGTCAGTGGCAGCGACTTTGAGGATGAGCCG
CTGGGGTTCCCTGGTACTCTCGATTCCGACCCCTTACCGACAAGTGAGGTCGTGGAGCCG
GTGGAGGAGGTGAACAGTGCCCCTTCTCCAGAACCAGAGACACAGGAAGCGCCGGTGGAA
AGCGAAACAACGGAACCTGTACTCGTTGAAGATGTACAGACGACACAAGTACCAGATCTA
GAGTCTGGACCTTGGAAAGTGAGTATTTTGGGCAGGAAATCAGCGAGTAGGATGGTGGAG
GGGGAGAGCTTACATGCGTGGTGTGAAGTGCTGAAGGTGTGTCTGAGGGTCTCCAATGTT
GGATCTGATTCATGTTTGAGTTATTTGCTTCTGTTGTTCATACACAGCTCTGAAAGCGGT
ATTGGCACCCTAGACCGAAATCAGATCTTGAATACACACCCCATGAGCTAGGAACGTGAA
TTGCTCGGACCCTTCGCACACCTGACACTAAATGATAGGCTGGATGTTGTTCGTTCGGAC
TACTGTCCCTTGGTTTCCATACTAACCCAGCGAAAACTGCGAACGCGAACATTCGCTCAA
CAACGACCATATGCATACGACCAGTTCATCTACAAGGGTCTTGGACTGGACGCCAGCGAT
ATCAGAGAACTGCATTACCACCGAAGTGACGATGAAGAGTACGAGTACCAGGATCAACAG
GAGGACATCGAAAACATTGCTGCAATAGACGCAGATGATTTGGCAGGTCTCATGTCCGAT
TCTGACTCACCGGACTTTGTTCCTCCTGTTGTATACAGCGCGGAACAAGCAGCTGAAAAA
CGAGCTGAGAAAGAGAGAAAATGTGTGGAAAGAGAACAAAAGCGACTCGAGGGGGAGAAG
TTACGTCTAGAAAAGGAAAAGAAACGGGCTGGGAAGGAACAGTTGCGTATAGAGAAGGAA
AAACGACGCCTGGAAAAGGAGGCAAGGAAAACTTCTAGATCGACCCAACCCACCGCTTAC
CAACGGTTTTTTCTCGAGTCAGACGATGAAGATGGAGGTCCAATTGATACACCTGGTGGT
GGTAGTGATGGAATTGCTGGCTCAGACCCGCCAAACCCATCTTCTCAGAGAAGTATTGTG
ATCACAGACGAACCTGAAATTGACAGAATGGAAGAGCCCAAGAAACGCAACAAATCGAGC
AATCCCAGGCCCCCGAAGCGACCAAGATCAAACGACTACATTCCAGCTTCTACAGCCAAA
ACGAGACGAAGACCTCAACAGCTGACTCTGGATTTTGGCACCACCAAGGGCAGCAAGGGT
GCTAGCAGAGACAATCACGTTCTGGCTGCCGTTCGAGCCATGGCAAAGTCAACAAAGGAA
ATGTTCACTAGGTCACATGCCATTAATGCTGCTCAGAAACGCATGTTGTCGTATCGCCGG
ACTCCCAACATTAGAGAGGAGCGGCATTGGTTGGACGACGGAGGAGGACAGATTGGAGAT
GGTACCGGAGGAGCAGGAGGGGGGAGGTCATGGGGTGGAGGACATGTAAGATCACGTGAC
CAGGGCACTTTGTCGTGGTCGCGTGAGGGAGGCAGGAATGGGAGCAGTGGCGGTGGGGGG
ATTGCTGGGTCACGGGTTTCAGCGGGTGGTGGTGGAGCATCAAATAACTCAATCCCTGGT
CTTGGCTCTGGCTCTGGGGGTGTAACACGTGGACAGACTAGGATTTCCAGATCACGTGGT
CTCACACGGTCAAGTCCTTCAGTATCACGTCCTGCTGGGTACCGTTCTCTACCCCGAATC
AGAGACAAACGAGCTGGTCCGTTGGAGCATATGAGACGAGCAGCGTGGAATCAGATTCAG
GAAATGAAAATGAAAGCTCGGGTGGGTGGTGGACACTATTCTGGTCATTCTGGCCCCGTG
GAGGACAACACAACCCAAAAAAAACACGTGACTAGCCACTCTATCAACCCTGGGCATGCC
CGACGGGGTGGTACTCGCCACCTTGGTCACAGAACCTCACCTTCGCCAACCTCCAGAAAC
GGTTTCATCAACGAGTACGGAGTTCGAGTTCTTCCTTCTGACAATGTTGCTGGGGAATAC
AACCAGCGGAGGCATGCTTCAGGTGTTCATGTTCAAAGTCTAGATATTGATCACGTGCAT
TTGGACGCTTCTCAGCGTGGTTCTCGGTTCAATGAAAAGGAGTCTGGAGAGTATGCTATT
CGAAGACGTATTGGAGGTCGCACTGGAGTCAGGCGTGAACCTGAACCTGAGCCTGAGACT
GTGTCTGACTTCGTCGGCTTGACAGAGATGATTGAGGGTGGAGATGAACTGCATGATACC
TTGGATGTTGACTACATTGGTGATTTTGATAAGCCCATCGATGTAGATATTGATCCCCCC
GCTCTTTCTTCCACCTTGGACCCTGTTCATGTGGAATTTGCCAATCGTCTTTCCCAGCAT
GACACCTTTGAAACTACCTTTGGTCTAGCTAACAAGATTTACACGCTGGAGCCCATTTTT
CTTGGACGTCTCAACTCGCCTTTGGAGACTTGGATGTGCCCTGTCTCTCAGATTATGGTC
AGCCTGAATGATGTCAAGCTGATCTTTGATAAGATTCTTGGCGTTATAGAGGACGGTAGG
CGTCGAGAGGATGTCTATGAGGCTCTTAGGTTGGTCTTTTCGCATCCTGTTCAAGAAACC
ACGGTTCTAGAGGAGTTCAAAAACAATATTATGGGTCTAGATGTCGGCGATCTTTCCGAC
TTGATCGTCTCTTTGGTCAATTATAGATGTCCTCTTGCTGGTGAGCTTCTCATTGACACA
GATAAGCTCTATGTTGCTGTCAAAGACCATGCTCGTCCATTGCTGGTTGAGGCAGCTATG
ATACGTAACGACCCTATCCACATCCCATTCTTGTCAGACGGCATTCCTTCTCTGGAGCGA
GCTTGGAGGAGTCTCTTTGTGGCCAAAGCCATTGGCAGAGACGAATCAGATGCCATGTTG
GCATTACTTGATCTGCTGCCGCCCACAATTGTCCACGAGGATCGTGACGTTCAACAGGTT
GACATTGAGCGTTACAAGAAGATTCTACTGATGAGAACTCAGCTACTCTGGCGATTTTCA
GGTGAAGCGATTCTCTGGTGGGCTAAGAACACCCCTTATCCAGATACAACTATTCCAGAG
CTTGACTTGGAGCGTCTGGCACCTGGAAATGCGTTCTTCACGGTTGCCAAGATGGTTTCG
GATGTGTACAAGAGTGGTCATTATGGCCCAGCTTCTGATGTCGCTGCTGGGCTTGTATCT
GGTGTTGGTCTTCGGTTTCCACGTGACGAAGGCTTCCATCGGAACAAACTGCGTAAGCTC
GCTCAAACTTACATTTATCTCATGCTCCGAGTTCGGGATATATATGATCCTGAACTTCGA
CCGTCGTTCGCGCAGCTTCAGGACACTGTCCACACCGACAAGGCGCACCTGGAGGTCATC
CGCATCGAGTTTGCCGCTGCTAGACAGACTCTTCAGATAGTCAATGGCAGTGGATTCACT
GAGGAAGATCGAAAGAGTGTCCTTAAGTGGCTTGATCAGATGATCCAAATGACCACTCGT
GAGTACGCTACCCTGGTTAGAACACGATACGCCGGAGAATATGAGAACCTTTTGATTCAG
ATATTCGAGCAGGTTGAGGAGGCTGGACAAAGTGTGATTACTCTTTTGACTCTTCCGGAT
GGCAGCTGGCAGAAAATGTCTGAGCCAATGAATCGAGCTTTGATCAAGTTGGTCCAAAAG
ACCCCTGATAGAGAACGTCCCTTGACAAAGGCTTTCGCCAAGTTTGTTGCCAAACATGGT
CCTAGGTACTACAAAGACTTTGCTCAGATGCATCCTCCTCCTCGCAGCTATCCCATGCCT
CAAGAGGCTCTCTGGATGACTATGTCAATTGAGGCAGGAACTTATGTGGATCCCATCGAT
GTGACTTACATTGCCGTCAAGTCGATGCTTCTCAAGAAGACTCACGAGCCGTTGTGGAGT
CATGTTGTTGAGCTGAAGGACGTGAATCTCACTGGCTTATCTCAAGACATGATCCTCCAG
AAAATTATGTTGGCTACAACTTCAGGGCACTTGGCAGGACAGCTACTGGAGTTCATACGT
GACAACCTTGACTTCTTTGACAAGGAGTCGAAGCTTCTTATTCAGAAACTGGTGTCTTAT
CTAAAGGGTAATGATAACACTGCTGGAGCTCCCCAGCTTCAATGGTTCCTGAACCCTGCC
AATTTTGAACTTCAAGCTGACTCGTCGCAATTGGCCCAGTACTCGAGTTTGTTAAAACGT
TCAAGACATGAGAGTGAGATCAAGAACTATTTGCTCGGCACGTTGTCCATTTCTCTCATT
CTCGACGGAGGGCAGGTCTTCTATGAGGCCGTCAAGGGCATTGGTATGGCCACAACTCAT
CCGATTCATGCTAAAGCCTTGATGCAGATGTTTGAGTCCTTGGTTTACTCCAAGAAGCAT
GCTACAGTGCTATTTCTGCCGCTATTCTTACGCCTCATGGTCACCATGGGCAATGAAGAG
CTATGGATCCAACTTTGGAGCCATGCCTACGTCAGGGTCAAGACAATCAGACTGGACCAC
CTGTCGAGTCTAGAGAACGCTTACCTTGCTGAATTTCTTCATCTCACCTCTCTCATCCCT
TCGGAAGATTCGACTTCGGTGCTCTTGGACATCTTAGGAGTACCTCACTCAGCAACTAGC
ATCTCATCCGCACTAACACGGCAAATGGACAGAGACGTAGACGCCACTCTAGAAAAGTTT
CATGAGAACAGTGGCAAATGGACTCGAGGAGTGGGAAACTCCACTGATAAAATTTCTCTG
CATTTTATTACGGCAGACAACATGGCCAGTCCTTATGACTCTGTCATCCAGTGCCTTGCC
AGCACTATCATGTATCACCCTGTGCTTCTACCTCGGCTCAATTTCCTCGCTTCTCAAAAT
CCCTGGATTGGGCGGTACTTGGAGCAGCATTATTTTCAGGGTTGCCAGGTGACTACTCTC
GACGATGTCTTCTTCTAATGAGATCTCAGCTATACTAGCTAATGCATTATTTATTATTTG
AA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28666g_CDS-001

Protein length: 1582 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E28666g_CDS-001 MEYVIRDMEYVSGSDFEDEPLGFPGTLDSDPLPTSEVVEPVEEVNSAPSPEPETQEAPVE
SETTEPVLVEDVQTTQVPDLESGPWKRKLRTRTFAQQRPYAYDQFIYKGLGLDASDIREL
HYHRSDDEEYEYQDQQEDIENIAAIDADDLAGLMSDSDSPDFVPPVVYSAEQAAEKRAEK
ERKCVEREQKRLEGEKLRLEKEKKRAGKEQLRIEKEKRRLEKEARKTSRSTQPTAYQRFF
LESDDEDGGPIDTPGGGSDGIAGSDPPNPSSQRSIVITDEPEIDRMEEPKKRNKSSNPRP
PKRPRSNDYIPASTAKTRRRPQQLTLDFGTTKGSKGASRDNHVLAAVRAMAKSTKEMFTR
SHAINAAQKRMLSYRRTPNIREERHWLDDGGGQIGDGTGGAGGGRSWGGGHVRSRDQGTL
SWSREGGRNGSSGGGGIAGSRVSAGGGGASNNSIPGLGSGSGGVTRGQTRISRSRGLTRS
SPSVSRPAGYRSLPRIRDKRAGPLEHMRRAAWNQIQEMKMKARVGGGHYSGHSGPVEDNT
TQKKHVTSHSINPGHARRGGTRHLGHRTSPSPTSRNGFINEYGVRVLPSDNVAGEYNQRR
HASGVHVQSLDIDHVHLDASQRGSRFNEKESGEYAIRRRIGGRTGVRREPEPEPETVSDF
VGLTEMIEGGDELHDTLDVDYIGDFDKPIDVDIDPPALSSTLDPVHVEFANRLSQHDTFE
TTFGLANKIYTLEPIFLGRLNSPLETWMCPVSQIMVSLNDVKLIFDKILGVIEDGRRRED
VYEALRLVFSHPVQETTVLEEFKNNIMGLDVGDLSDLIVSLVNYRCPLAGELLIDTDKLY
VAVKDHARPLLVEAAMIRNDPIHIPFLSDGIPSLERAWRSLFVAKAIGRDESDAMLALLD
LLPPTIVHEDRDVQQVDIERYKKILLMRTQLLWRFSGEAILWWAKNTPYPDTTIPELDLE
RLAPGNAFFTVAKMVSDVYKSGHYGPASDVAAGLVSGVGLRFPRDEGFHRNKLRKLAQTY
IYLMLRVRDIYDPELRPSFAQLQDTVHTDKAHLEVIRIEFAAARQTLQIVNGSGFTEEDR
KSVLKWLDQMIQMTTREYATLVRTRYAGEYENLLIQIFEQVEEAGQSVITLLTLPDGSWQ
KMSEPMNRALIKLVQKTPDRERPLTKAFAKFVAKHGPRYYKDFAQMHPPPRSYPMPQEAL
WMTMSIEAGTYVDPIDVTYIAVKSMLLKKTHEPLWSHVVELKDVNLTGLSQDMILQKIML
ATTSGHLAGQLLEFIRDNLDFFDKESKLLIQKLVSYLKGNDNTAGAPQLQWFLNPANFEL
QADSSQLAQYSSLLKRSRHESEIKNYLLGTLSISLILDGGQVFYEAVKGIGMATTHPIHA
KALMQMFESLVYSKKHATVLFLPLFLRLMVTMGNEELWIQLWSHAYVRVKTIRLDHLSSL
ENAYLAEFLHLTSLIPSEDSTSVLLDILGVPHSATSISSALTRQMDRDVDATLEKFHENS
GKWTRGVGNSTDKISLHFITADNMASPYDSVIQCLASTIMYHPVLLPRLNFLASQNPWIG
RYLEQHYFQGCQVTTLDDVFF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG