YALI0E28534g

Overview

Description weakly similar to uniprot|P33890 Saccharomyces cerevisiae YOR010C (ohnolog of YIL011W) TIR2 cold shock induced protein
Locus type CDS
Locus tag YALI0E28534g

Location

Species Yarrowia lipolytica Positions 3380885..3381869
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 985 (nuc.)
Previous locus YALI0E28512g Next locus YALI0E28548g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28534g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28534gYALI0E28534g_mRNA-001YALI0E28534g_CDS-001

Nucleotide sequence

 

>YALI0E28534g
ATGACCCACCAATACAACGACAAACACGGCTGCGAACTGCTGGGCAAGTACATTCTGCGA
GGCCAGGTCAGAGCCATGCCCTACCTTCCCACAGACGGCCCCGTGCATCCTCAGGCCGAA
CAACAACTGATGATGGTCACCTCTTCATGGGTGAACGTGCCCGAGATCCGAGACCAGCGA
TCTTTTGTTCTGTGGCTGCGATGGATGAACCGTGCCGAAATCGAGCTCGACAAGTGGGCT
GCTGCCTGCTCCCCCCTTCCTCCTGTGGACCTCGTGTGGAAGGAGCTCACCCGAAAGGGC
GTTCGAGGCGGCGACGGAGTCAACTGGTACCAGCGATTCCGAAACGCCGCCTTCCACGAT
CTCGGAGACATGGCAGGCCACCAGCTTGCTCTGGAGACCCTCGTCAACCTCCATCCTGCC
GCCTTTTCCGAGCCTCTCGAGTACATGAAGATTTACTGTGTTCTGTGTGAGCTCACTGGC
AACCCCTTCAACATTGAGCACGCGCTCAAGAGAATCTGCAACTGGGCTGAGAATTACGAC
CCTCAAATCTCCTTCGACACGGTCATTCAGACAGCCCGACCCGACCTGGCCGGCTGGAGT
TACATCAACTCGCGATCTTGGTCGGAGGCTCGAGCCCGAACCCTGGCTATCCAGCGAGAA
CTCAAGGAGAGCCTGCCCAAGGCAACTGCCGTCATGAGCAGTTCGCAGAGCACGCGATCG
GTGGCTTCCCAGAAAAGTAACAAAAGCGCGGGAAGCAGTAAGTCCAGCAAGAGCATATTC
GATCGAGTGAGACTGGGTACCTTTAGCGGGGCTTCGTCGGTGTACGAGACCACCCAGACC
TCGAGGTAATCAACCCATCTCACAAGAATAGAGGCAGGCACTCTTGTACAACACGGCGTT
GTACCACATGACACATTATTATATACGAGCAGAAGGGCTCAGTACACAGGGAGGATAGCA
TCTAACAATATATTTATCATTATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28534g_CDS-001

Protein length: 283 aa.
Product: Conserved hypothetical protein

>YALI0E28534g_CDS-001 MTHQYNDKHGCELLGKYILRGQVRAMPYLPTDGPVHPQAEQQLMMVTSSWVNVPEIRDQR
SFVLWLRWMNRAEIELDKWAAACSPLPPVDLVWKELTRKGVRGGDGVNWYQRFRNAAFHD
LGDMAGHQLALETLVNLHPAAFSEPLEYMKIYCVLCELTGNPFNIEHALKRICNWAENYD
PQISFDTVIQTARPDLAGWSYINSRSWSEARARTLAIQRELKESLPKATAVMSSSQSTRS
VASQKSNKSAGSSKSSKSIFDRVRLGTFSGASSVYETTQTSR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG