YALI0E28314g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E28314g

Location

Species Yarrowia lipolytica Positions 3347965..3349496
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1532 (nuc.)
Previous locus YALI0E28292g Next locus YALI0E28336g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28314g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28314gYALI0E28314g_mRNA-001YALI0E28314g_CDS-001

Nucleotide sequence

 

>YALI0E28314g
ATGGATAGCGACTACGGAATCCAGTCAATTTTGTCGGACGACGAGCAAGACGCCTGGGAC
GAAATTGACGCTCCTTTTCTCGAGCGGCCCAGCTCCTCCGGTCTGGTGATGCCTGCGATT
TCCTCCGACGGCTCCGTAGTGTCTAGTCGAGAGATAATGAGCAAGGGAGACGGCTTTCTG
AACGGTGATTTCCCAATGCCAAAATTTGCGCAGTTATGGAACAAATCCGGGTGTTTGTGT
ATAGAGCCGCTCTGTGGTTGTGACAAGGTGAGGGAAAAGGTGGAGGCTCATCTTGGCAAT
ATGACTGAGAAGCAGAGGGGATACGTGGTTGTCTTCGAGGTCGAGCCTGAAGCTGCCCAG
CTGGCCAAGATGGCAGTGTTAAGGAACTGGAAAGGAGACGAGAAAGTCTTCATGTTTTTG
GATACCAAATTCGAGCTTTCCAAGAAGATGCGAGATGGTATTAATGAGGTGGAAAGAGTG
GAACTGGTTGTTTTGGGTGGTGAAGAGAAGAAGGCAGATGGTGATATTACCATTGATGCG
AAACCGGCACATGGTACAAAGAGAATGAGCGCCGACGCAGTATCCTCCTTCCTCAAAATT
CTCTTTTCTATTGGGATTGTGTTCGTTCTGTTCAACCCTCAGAAGCAAACCAGTCCCTCT
TTCTCAGCCTCCAATACCACCTTCTATGGTCCTCCGCAGCCTGTGACCCCGTTTAAGTAT
GAGATTCCAGACTCCATGATATTTCCATCTTGCTATTACTTGGACAAGCCAGAGGTCCAC
GTCACCGCTCCTTCCCATCAGAACAGTTTAAGCATAGAAACAGTCTTCAACTTTCTTTCT
GAGGGCTTTCAGCGACTATGGAACGGTATCCTGAGCATACCGTCTTTGCTGAGTCGACTT
TTGGGACTTGATAAAGATGTGTTTGAGACCAACAGTGAACGAACGTTGAGGAAGATTGGG
CTCGACATGGATCTATTGGTTGAACTAATGGACGAAATTCTTGAGGAGCAGACTGAGCAA
TCTCTTCACGATGCCCTCTATGTCTGGAACAAGATGGGCTCCGACATAGCTGAGCCCCTC
AAGCGCCTGAAGTACGACGAGAAGACAACTTCTGCCAACTTTCTGTCAATCATAAAGCTT
GAGAGGAGATTGAAGGTAGTAGGGGAGAAGCTGGCTACAACTAAGAGAGAGGTTAGTGCA
ATGAGAGATCGTGAGAAGGGAGGGGCACGAGAGAAAGCAAGAGGAGGTGAGATTGCTCGT
CCACGTGAGAAGATCAATTCTCATCCGATTGTTGGCGCACGTGAAAATCCTGATGTTCTA
AATATGTCTCCATTACCCACTGACTACATGAACCGAATGGAATACCGCGACCGACAGGGC
CATGGGCGACGAGGAAGGAAGAGAGAGAGAGAGAGGGGAGGACCGAGGCGCTCATAGGAA
AGGAGGCAGAGAGGAGATTTGATACTTGAAGGAGTGAATTATCTATTGTGGTTTATCCAG
TGTTATTTATTATAATATCGAGTACAGTGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28314g_CDS-001

Protein length: 479 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E28314g_CDS-001 MDSDYGIQSILSDDEQDAWDEIDAPFLERPSSSGLVMPAISSDGSVVSSREIMSKGDGFL
NGDFPMPKFAQLWNKSGCLCIEPLCGCDKVREKVEAHLGNMTEKQRGYVVVFEVEPEAAQ
LAKMAVLRNWKGDEKVFMFLDTKFELSKKMRDGINEVERVELVVLGGEEKKADGDITIDA
KPAHGTKRMSADAVSSFLKILFSIGIVFVLFNPQKQTSPSFSASNTTFYGPPQPVTPFKY
EIPDSMIFPSCYYLDKPEVHVTAPSHQNSLSIETVFNFLSEGFQRLWNGILSIPSLLSRL
LGLDKDVFETNSERTLRKIGLDMDLLVELMDEILEEQTEQSLHDALYVWNKMGSDIAEPL
KRLKYDEKTTSANFLSIIKLERRLKVVGEKLATTKREVSAMRDREKGGAREKARGGEIAR
PREKINSHPIVGARENPDVLNMSPLPTDYMNRMEYRDRQGHGRRGRKRERERGGPRRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG