YALI0E28292g

Overview

Description similar to uniprot|Q10138 Schizosaccharomyces pombe Hypothetical protein C3H8.02 in chromosome I
Locus type CDS
Locus tag YALI0E28292g

Location

Species Yarrowia lipolytica Positions 3344451..3345900
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1450 (nuc.)
Previous locus YALI0E28270g Next locus YALI0E28314g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28292g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28292gYALI0E28292g_mRNA-001YALI0E28292g_CDS-001

Nucleotide sequence

 

>YALI0E28292g
ATGTACCCGTGGGTACCCCCCTCTGCCTCCCAAACACGTCTTTCAGTAGCCTCCCCGCCA
TTTAGCTCTAACAACCGAGCTAATCACAGACATTGTGCATGTATAAGTATGAGTAGCAGT
TCTTCACTCTCCTTCAACACCACCAACGACATCACCAACGACACGATTATGGTGGCCGCT
CTTCCAGGACGAATGGGCAATCTCACGCCCGAGCAGACAGCCCAGCTCAAAGACATGTGG
GCCCATCTGATGGCTGCTATTGGAGCTCTGGATGACGAGAACCTCAAGGAGGTGACTCGA
GCTGTGCAGGAAATGGACTTTGAGGCCGGCAAGGTGGCTGCCGCCAAGCACGGCACCCCC
ATTGATGATGTGAGCGCGCTAGATCTGGCTGCCTTTGCCGAGGTTCGAAAGACCATGTCC
ATTGAGCAGCTGCGTCTGGCCTTTTGGGATATGGTCCACGGAGATTCTCCCGACAACTTG
CTTCTGCGGTTCTTGAGAGCCCGAAAATGGGATGTGGGTAAGGCGCTGGCAATGATGGCC
AGGACGTTTCACTGGCGGGTGTTTGACGGCAAGGTGGCCGAGACTGAGCTTTGGGGAGAG
GCCGGAGCTCTTCGGGACGGAGACGACGAGTTTCTGCTCCAGTTCCGATCCAAAAAGTGC
TTTATCCACGGAAACGACAAGGAGGGACGACCTGTGGTCCACGCTCGACCTGTCAACCAT
AACCCCAAGCTGCAGACCCAAGAAACCATTGAGAAGTTCACTGTCCATGTATGTGAGACT
ACTCGTCTGATGCTGCATGAACCCGTGGACTCCGCTACCGTGGTGTTCGATATGAAGGGC
TTTGGTCTGTCTAACATGGACTACAATGCTGTCAAGTTTGTTATTCAGTGTTTCGAGGCC
CATTACCCCGAGTGTCTGGGAGTTCTGCTGGTCCACCGAGCCCCCTGGGTCTTTTCCGGT
ATCTGGAAGATCATCAAGCCCTGGCTGGATCCCGTTATCGCCAAAAAAATCCACTTTACA
AGTAACACCAAGGATGTTGAAAAGTTCATCGATATCAGCAACATCCCCAAGGATATGGGC
GGTACAGATCCCTACCAGTATGTCTATGTGGAGCCCAAAGAGGGAGAGGCTGCCAAGACT
GAGGACTCTGAGACGCGAAAGAAGCTGGAGAATGACCGTCTCAAGCTGTACGAGGAGATG
GAGCAGAACACTGTGGCCTGGATTAAGGCTGTTACTCCCGAGGAAGAGAAACAGGTACTG
GCCGACCGAAAGGTCGTCACTCAGAAGCTCAGATCGCAGTGGTGGGACCTGGATCCTTAT
CAGCGAGCCCCTTCTATCCTAGATAGAATTGGAGACATCAAGTATGAGTAAGTCCAGAGT
GGAACGACTACCACCACATCCGGTACATTATCGGTACATTACATGACATTAATATATTGT
ATGGTTGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28292g_CDS-001

Protein length: 457 aa.
Product: Conserved hypothetical protein

>YALI0E28292g_CDS-001 MYPWVPPSASQTRLSVASPPFSSNNRANHRHCACISMSSSSSLSFNTTNDITNDTIMVAA
LPGRMGNLTPEQTAQLKDMWAHLMAAIGALDDENLKEVTRAVQEMDFEAGKVAAAKHGTP
IDDVSALDLAAFAEVRKTMSIEQLRLAFWDMVHGDSPDNLLLRFLRARKWDVGKALAMMA
RTFHWRVFDGKVAETELWGEAGALRDGDDEFLLQFRSKKCFIHGNDKEGRPVVHARPVNH
NPKLQTQETIEKFTVHVCETTRLMLHEPVDSATVVFDMKGFGLSNMDYNAVKFVIQCFEA
HYPECLGVLLVHRAPWVFSGIWKIIKPWLDPVIAKKIHFTSNTKDVEKFIDISNIPKDMG
GTDPYQYVYVEPKEGEAAKTEDSETRKKLENDRLKLYEEMEQNTVAWIKAVTPEEEKQVL
ADRKVVTQKLRSQWWDLDPYQRAPSILDRIGDIKYE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG