YALI0E28237g

Overview

Description similar to uniprot|Q05567 Saccharomyces cerevisiae BST1 DPL1 YDR294C Dihydrosphingosine phosphate lyase
Locus type CDS
Locus tag YALI0E28237g

Location

Species Yarrowia lipolytica Positions 3333626..3335779
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2154 (nuc.)
Previous locus YALI0E28226g Next locus YALI0E28248g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28237g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28237gYALI0E28237g_mRNA-001YALI0E28237g_CDS-001

Nucleotide sequence

 

>YALI0E28237g
ATGGCGATCCCCCACTTGGAGTGTCTGCAGAAATGCGTCCACGAGCTCCATGCCCTGTTG
CATCAGCACTACCACGAGTTCCAGGCTTCTCCGGTCGCTTACCTTCATTCGAAGCACGAC
TGCGTGAGGGCTGAGGTAATTGAGCATTTCCAGAATGCCACTACCTATGAAAAGTGAGAA
TAAGCGAAGGATGAGACTGTTTGAGTACTACTAACCCAGATTTCGAGATGCGGTATTTAT
TGTGTGAGTATACACGGTCCCATTGAGAATCAAAACGACACAAGTAAAAGGCGATCTTAC
AGAGATACCATTGACGCCATGACACTCACGACGTTTTACCCATGAGATCTTGGAGCAATT
ATTCACAGAGGCTTCTCTTGGCCGTACATCCGACCGTCCGACCGGGAGCACACGGACATG
ATATCAGTCATCATATGTTAGCTACGACATACAATTAACAGCTACTCGCTGTTCATGTGA
TTTGATCTGGAAACGATGAGCTAGAGCAACCCAGCCATGTATATACTAACTCAGCGTCAT
TCTCACAGCCCTTGGCAACTTCCTTTCTTTTATTCACACCATCTTTGCTGATGGACTTCA
AAACACATTCCGTTTCCATGCCAGAAAAGTGACCAAAAAGATTCTCGACATTCCCTTCAT
CAAGGCTAAGATTGACAAGGAGACAGGGGTTGTGATTGAGAAGATCCAGAACGACATTAT
CGTCCGAATGCCCGGCACCCAAATCTTTGGGACTCTCCCTGCTGAAGGTATGACCAACAC
AGAGGTCATCACTGAGATGTCTAAGTACCACGATATGAAGCGAACCTTCTGGGAAAAGGG
TCGTGTAAGTGGAGCTGTCTACCACGGAGGTAAGGAGCTCACAGACCTGCAATCCGAGGC
ATTCTCCCAGTTCACAGTGGCGAACCAGCTTCATCCCGATGTCTTCCCGGGTGTCCGAAA
GATGGAGTCTGAGGTTGTTGCTATGGTTCTGGCTCTTTTCCATGGCCCTGAGGGCTCTTG
CGGAACCTCTACATCTGGAGGTACCGAGTCTCTCCTGCTGACTTCTCTGGCCGCCAAGAT
GAAGGCCTACAACGAGCGAGGCGTCACACATCCCGAGATTATTGCTCCTATCACTGTGCA
TGCCGGCTTTGACAAGGCTGCCTACTACTTTGGAATGAAGCTGCGACATGCCCCCGTCGA
TCCGAAGACTATGAAGGTTGATCTGAAGGCTGTGCGACGAATGGTTACCAGAAACACCGT
TCTGCTAGTCGGATCTGCCCCCAACTTCCCCCATGGTATTATCGATGACATCGAGGGCCT
CTCTGATATCGCTCTCAAGCACAAAATCCCCCTGCATGTGGATGCTTGTCTGGGCTCCTT
TATCGTCCCTTACCTTGAGAGAGCTGGCTTCGACAAGATCCTGTTCGATTTTCGAGTCCC
TGGTGTCACTTCCATCTCATGTGACACCCACAAGTACGGATTTGCCCCCAAGGGATCTTC
TATCATCATGTACAGAACACCCGAGCTTCGACATTACCAGTACTTTGTTGCACCCGACTG
GACCGGAGGTATCTACGGCTCTCCCACTCTTGCTGGCTCTCGTCCTGGAGCCATCATGGT
CGGATGCTGGGCCACCATGCTATCTGTCGGAGACAACGGATACTTGGAGTCTTGTAAGGA
GATTGTCGGAGCTGCCCGAAAGTTTCGAAAAGCTGTGGACGAGGAGATTCCTGACCTCCA
GATCATTGGAGATCCTCGAGCATCTGTTATCGCCTTCGGTTCTGACTCTGTCAACATCTA
CGATCTATCTGATGCCATGAGCAAGAAGGGATGGCACTTGTCGACTCTGCAGAACCCCCC
AGCTGCCCACGTAGCGTTCACCAAGCCTGCTGTGGCTGCTGTAGACGATCTGGTTTCTGA
TCTCAAGAGCTGCATTATCGAAATGAAGAAGGCCGGCAATACCAAGGTGGAGGATGGAAC
GGCTGCTTTCTACGGTGTGGCTGGTTCCATCAAGACCGCTGGAGTTGCTGACCGGCTTGT
GTGCGGTTTCCTTGATGGTCTATACAAGCTATAGATACTTCTCGGTATCATTCTAGTTTT
CTTGAAGATGATATATGTATTAGTATGATGAATGAGCATTTACTCGAGTTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28237g_CDS-001

Protein length: 579 aa.
Product: Dihydrosphingosine phosphate lyase, putative

>YALI0E28237g_CDS-001 MAIPHLECLQKCVHELHALLHQHYHEFQASPVAYLHSKHDCVRAEVIEHFQNATTYEKFR
DAVFIVVILTALGNFLSFIHTIFADGLQNTFRFHARKVTKKILDIPFIKAKIDKETGVVI
EKIQNDIIVRMPGTQIFGTLPAEGMTNTEVITEMSKYHDMKRTFWEKGRVSGAVYHGGKE
LTDLQSEAFSQFTVANQLHPDVFPGVRKMESEVVAMVLALFHGPEGSCGTSTSGGTESLL
LTSLAAKMKAYNERGVTHPEIIAPITVHAGFDKAAYYFGMKLRHAPVDPKTMKVDLKAVR
RMVTRNTVLLVGSAPNFPHGIIDDIEGLSDIALKHKIPLHVDACLGSFIVPYLERAGFDK
ILFDFRVPGVTSISCDTHKYGFAPKGSSIIMYRTPELRHYQYFVAPDWTGGIYGSPTLAG
SRPGAIMVGCWATMLSVGDNGYLESCKEIVGAARKFRKAVDEEIPDLQIIGDPRASVIAF
GSDSVNIYDLSDAMSKKGWHLSTLQNPPAAHVAFTKPAVAAVDDLVSDLKSCIIEMKKAG
NTKVEDGTAAFYGVAGSIKTAGVADRLVCGFLDGLYKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG