YALI0E28006g

Overview

Description similar to uniprot|C4YNQ5 Candida albicans ACP3 Candidapepsin 3 precursor (Aspartate protease 3) (Secreted aspartic protease 3)
Locus type CDS
Locus tag YALI0E28006g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3317261..3318424
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1164 (nuc.)
Previous locus YALI0E27984g Next locus YALI0E28028r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28006g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28006gYALI0E28006g_mRNA-001YALI0E28006g_CDS-001

Nucleotide sequence

 

>YALI0E28006g
CTGGTAACAGCTGCTCCCTCTTCCCTGGGATACCTGGCTGTGGCTTTTACCAAGCACACC
GCCAAGGAGACGTCCAGCCCCCACGCAAACTTCGAGGGCGTTCGCCACCTCTGGTCCAAC
ACCACAGTCCTCAGAAAGCGACAGACAGATGTCACTCTGACTTCTCAGAACTACGTCTTC
TACTCTGCTGACATCACTATTGGCACTCCTGCTCAGGAATTCACGGTTCTGGTTGACACT
GGCTCTTCTGATCTTTGGGTCTACTCAAGAAACGACACCCAGGACTGTGCCAACAATGCC
TGCCAAGCTACCGGCCAATATGACTCGTCTGCCTCTTCTTCCTACAAGTTCGTCTCTAAC
GACTTCTCTATCCAGTACGTCTCTGGAAGCGCTGCTGGAAACTGGGTCACGGACACTATC
ACTGTTGGAGGCGCTAGTGTACCTGATTTCCAATTCGCTAGTGCTGTTGATGCCCCTGGG
GGAGTAGGTGTGTTTGGAATTGGTCTTGCCTCTGGAGAAGCAGCCAAGGTCAAGTACGAT
AACTTCCCTGTGATGCTCCAGAAATCAGGAATCATTTCCCGAAACGTCTACTCTCTCTAC
CTTGATTCCATTGATGCGGCCACCGGCTCTGTCCTCTTCGGAGCTGTTGACTCTTCCAAG
TACTCTGGTTCTCTCGAGACTTTGCCTCTGACCTCGCCCAACGCCTTCCAGGTCGCTTAC
GGAGACATTTCGGTAAATGGACAGAGTGTTTCCAGCGGCGGAAATGCCATTCTCGACTCC
GGAACCTCTTTCTCGTACATCCCTGAAGCTGCATTTGCTGGTCTTCAGAAAAAGCTCAAG
CTGGGAACCCTCGAACCCAACACCCAGCTATACACTATTGATTGCAACGCTGCTTCTTTC
AACGTGGACTTCAAATTTGGAAGCTCGACCATCTCTGTTCCTTCTTCTCAGCTCATCATG
CCTCTCAAGAACTTTGGGCTCAACTCCAACCAGTGTGTCTTTGGTATTGTCTCTACCAAG
TACTCTTCTGGTTATGTTCTTCTCGGAGACACCTTCCTGCGATCTGCCTACGTCGTCTAC
GATCTGGACAACAAACTCGTCGGAATCGCTCCAGCCAAGTACGGCACCGCGAGCTCCATT
CAACGAGTCACTGGTTCCCTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28006g_CDS-001

Protein length: 388 aa.
Product: Candidapepsin 3 precursor, putative

>YALI0E28006g_CDS-001 LVTAAPSSLGYLAVAFTKHTAKETSSPHANFEGVRHLWSNTTVLRKRQTDVTLTSQNYVF
YSADITIGTPAQEFTVLVDTGSSDLWVYSRNDTQDCANNACQATGQYDSSASSSYKFVSN
DFSIQYVSGSAAGNWVTDTITVGGASVPDFQFASAVDAPGGVGVFGIGLASGEAAKVKYD
NFPVMLQKSGIISRNVYSLYLDSIDAATGSVLFGAVDSSKYSGSLETLPLTSPNAFQVAY
GDISVNGQSVSSGGNAILDSGTSFSYIPEAAFAGLQKKLKLGTLEPNTQLYTIDCNAASF
NVDFKFGSSTISVPSSQLIMPLKNFGLNSNQCVFGIVSTKYSSGYVLLGDTFLRSAYVVY
DLDNKLVGIAPAKYGTASSIQRVTGSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG