YALI0E27984g

Overview

Description similar to uniprot|I9NPS9 Coccidioides immitis urea transporter
Locus type CDS
Locus tag YALI0E27984g

Location

Species Yarrowia lipolytica Positions 3314897..3316843
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1947 (nuc.)
Previous locus YALI0E27962g Next locus YALI0E28006g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27984g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27984gYALI0E27984g_mRNA-001YALI0E27984g_CDS-001

Nucleotide sequence

 

>YALI0E27984g
ACAACTGCAATGACAGGCTACATTTCTGAACCGGCGTCCAACGCCATCATCTACTGCACC
CTATGTTTCTTCCTGGTCATGGGAGTAGTGGTTGGCTACTTGCACATGCGAAAACAGAAG
AAAGAGAACCAGGGCAGTGAAGGATTCTTGTCTGCGAACAACACAAAAACAGCGCTTCCG
CTGGCCATTAATTTTGTGGCATCAGGTGAGTACTAACTGAACAGAATCATGACTTGCACT
GCGGGTGTTTTTGGAGGCTTTTGAGACGGTATAACGACCGCTGGTGTTAACTGTCTCACC
CTCCAAAGGCTGAGATTACACCGCCACACTCGAACAAGATAATGCTTGCGTGAGAAAGTG
CGTTACTAACCCAGCCATGGGAGCTGGAACCCTCAATGCCTATCCCGACATTGCTGTGCG
AGCAGGTGTCGAGGGCTTGGTTGTCTACGGTCTCTCTTCTGCCCTCCCCATGATGCTTTT
CGCCGGAGTAGGCCCCATTGTCCGAAAAGCATGCCCCGATGGCTTTGTGCTCACAGAATG
GACCCGACTAAGATACGGCTGGCTCACTTCCTTCTACCTCACCTGTCTCACCATTGGAAC
AATGTATCTGTATATGGTTGCTGAGCTGGCTGCTGTGCAGGCTGCAATTGAGACACTTAC
TGGAATTGATGCTCTGCCCGTCCTGATTGTTGAGGCTGTGTTCACCTCCATCTACACTGC
TGTCGGAGGTTTCCACACATCTTTCTTCACAGACAACTTCCAGGGAGGAATGATGTTGGT
GCTCATGGTAATTGTTTGTGTTGGTCTGGGAGTCTACTTCCACGTTGATCCTTCTGAACC
CGCCAAATCCGGTATGCTGGGCCCGAACCTGCTCGCTAACAAGCTCATCTACATTCTTCC
TGTTGCCATTGCTACCAACGATTGCTTCTTAAGTGGTTTCTGGATGCGAACTTTTGCTTC
AAAGAACAATGTTGAGCTATTCTGGGCCTGCGCTATTGCCAGCTCTATCGTTCTTATTGT
TCTGACCGTTGTTGGTCTTACTGGCTTGCTTGCTGTCTGGGCTAAGCTTGAGATTGATGG
ACAGGTCTTTGTGTACGGAGACGAGCGATCTGCTCTCGCTTTCTTCTACGTTCTCAAGGA
GATGCCTGGGTGGGTGATTGGGTTCACCGTTGCATTTGTCCTGTCTCTCTCCGTCGCTTC
TTATGACTCCTCTCAGTCTGCGATGGCTTCCACTATCTCCAACGACTTCTTCCGAAACAA
GATTCCCATGGTCTGGGTGCGTCTTATTGTGCTGTGCATCAACGCCCCCGTCATCGTGGT
TGCCCTCAAAGCCCCCAACGTTCTGAACATTTTCCTGATTGCCGATCTTTTCTCGGCAGC
CGTTATCCCCATTATGTTCTGTGGTCTTTCCAAGCGAATGTACTTTATTTCTGGCTGGGA
GGTCATCGGAGGCGGTTTCGGAGGTATGCTTACAGTATTCATTTTCGGATCCATCTACTT
CAAGAGTGCCCGAGAGGGTATCAAGCTGATTATTCTATTGGAGGGTCTATACGGGGATGA
CTGGTCTGCTTTTGGAGCCTTTGTGGCCGCACCTGTAGGCTCTCTTCTCTGGGGTTTCGG
AATTCTTACTGTTCGTCTGACAGTTCTTAAGATCTACTCGCTCATCACTGGCAAGCCTTT
CACTGCCCTTGACAAGCCTTCAGATGATAAGACCGGTATTGCTGTCATTCGGGAGATTGG
CCATGTTGAAGATGACAATACCTCGGAGTCCATCATTCTCGACCGAAAGGACCCCAACAT
TCTCACCGAGACACACATTCTCAAGGAGCAGCCTACAGTCAAGGAGGAGTCGTATGAGGC
GTAGATATGATCCCCCAACCCTCAAAAATCGCATTTGCGTTCTTAGTATAGCTTAGTAAT
TTTTATTTCTTCATTCGAATTTTATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27984g_CDS-001

Protein length: 562 aa.
Product: Urea transporter, putative

>YALI0E27984g_CDS-001 MTGYISEPASNAIIYCTLCFFLVMGVVVGYLHMRKQKKENQGSEGFLSANNTKTALPLAI
NFVASAMGAGTLNAYPDIAVRAGVEGLVVYGLSSALPMMLFAGVGPIVRKACPDGFVLTE
WTRLRYGWLTSFYLTCLTIGTMYLYMVAELAAVQAAIETLTGIDALPVLIVEAVFTSIYT
AVGGFHTSFFTDNFQGGMMLVLMVIVCVGLGVYFHVDPSEPAKSGMLGPNLLANKLIYIL
PVAIATNDCFLSGFWMRTFASKNNVELFWACAIASSIVLIVLTVVGLTGLLAVWAKLEID
GQVFVYGDERSALAFFYVLKEMPGWVIGFTVAFVLSLSVASYDSSQSAMASTISNDFFRN
KIPMVWVRLIVLCINAPVIVVALKAPNVLNIFLIADLFSAAVIPIMFCGLSKRMYFISGW
EVIGGGFGGMLTVFIFGSIYFKSAREGIKLIILLEGLYGDDWSAFGAFVAAPVGSLLWGF
GILTVRLTVLKIYSLITGKPFTALDKPSDDKTGIAVIREIGHVEDDNTSESIILDRKDPN
ILTETHILKEQPTVKEESYEA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG