YALI0E27632g - SSL2

Overview

Description uniprot|Q6C4D8 Yarrowia lipolytica YALI0E27632g SSL2 Multicopy suppressor of SLS2 secretory defects, putative calmodulin-dependent ser/thr protein kinase
Locus type CDS
Gene name SSL2
Locus tag YALI0E27632g

Location

Species Yarrowia lipolytica Positions 3261349..3262668
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1320 (nuc.)
Previous locus YALI0E27624g Next locus YALI0E27654g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27632g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27632gYALI0E27632g_mRNA-001YALI0E27632g_CDS-001

Nucleotide sequence

 

>YALI0E27632g
ATGACCTTCCACAGCTTGGTCAACAAAGTCTCGGGTCAACCACCTTCCTACAACAAGAAG
GCCGACTACAAGTTTGGCAAGACCCTGGGAGCCGGTACCTTCGGTATTGTCAAGTACGCA
AAACAGCACTCGACCGGCGAAGAGGTGGCCGTCAAGATCATTGTCAAGAAAAACCTCAAG
GGAAACGACCACGTGGTAATTGAAGAGCTCTCTTTGCTCAAGGAGTGCCACCACCCACAC
ATCATCGCCTTCAAGGACTGGTTCGAGAGCAAGGAGAAGTTCTACATTGTCACCCAGCTC
GCTACCGGAGGCGAGCTCTTCGACCGAATCTGCGATTATGGCAAGTTCACCGAAAAGGAT
GCCCGACAGTCCGTGAAGGACATCCTCGAGGCCGTCGATTACCTGCACAGCAAGGACATT
GTGCACCGAGATCTCAAGCCCGAGAACCTGCTGTTCGTTACCCCCGATCCCCATGCGTCT
TTGGTGCTCACCGATTTCGGTATCGCCAAACACCTCAAGTCTCCCGATGAGGTGCTACAC
TCCATGGCCGGTTCCTTTGGATATGCAGCCCCCGAGGTGCTCAAGGGCACAGGACACGGA
AAGCCTTGCGACATCTGGTCTCTCGGTGTCATCACCTTCACCATTTTGTCCGGCTACTCT
CCATTCCGATCTGAGACCGTTCGGGACTTCCTGGAGGAGATCGAGGGCCCCAACGCGCTT
GTATTCCACAAAAAGTACTGGCAAGATGTGTCTGAGGACGCCAAGGACTTCATCAAGTCG
TGTCTAGCTCTAGACCCTGCTCTCAGACCCACATCTGCGGAACTGCTGAAACACGAGTGG
ATCACGGGCGATACCACCAAATCTATCGATCTACTGCCCAACATTCGAGAAGGCTTCAAC
GCTCGATCCAAGTTCAGACAGGCTATCGAGGCTGTACGACTGCATAACCGTATCAAGTCT
CTTAACATGGTGGACTCTGACGATGAAGACGAGGAAGAAGAAGCTGTCGCAGACACCGAG
AAGCCCTCTCTGCTATCTGTTGCCAGCAGCATGCGACCACGAGCCCATTCGCGGTCTAAG
AGTGGCACCGGAGCTGCTGCTTTCCAGGAGGTGGTGCTTGCTGCAAAGAGAAACAAGGAA
CTTCTTGAGAAGGAGAAGGCGAGCAAACAGGACGCTGCGGAGGAGAAGTAAGTGGATATC
TTAAGAATTATAATGTGTAGTACAAGTACAAAAATCTGTCATCAATAATTTATAAACATC
TGCAGAATTTGATTGAATATTTTACTGTGTTGTTATAATATACCTGATGCTATCGTGTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27632g_CDS-001

Protein length: 397 aa.
Product: Multicopy suppressor of SLS2 secretory defects, putative calmodulin-dependent ser/thr protein kinase
Gene: SSL2

>YALI0E27632g_CDS-001 MTFHSLVNKVSGQPPSYNKKADYKFGKTLGAGTFGIVKYAKQHSTGEEVAVKIIVKKNLK
GNDHVVIEELSLLKECHHPHIIAFKDWFESKEKFYIVTQLATGGELFDRICDYGKFTEKD
ARQSVKDILEAVDYLHSKDIVHRDLKPENLLFVTPDPHASLVLTDFGIAKHLKSPDEVLH
SMAGSFGYAAPEVLKGTGHGKPCDIWSLGVITFTILSGYSPFRSETVRDFLEEIEGPNAL
VFHKKYWQDVSEDAKDFIKSCLALDPALRPTSAELLKHEWITGDTTKSIDLLPNIREGFN
ARSKFRQAIEAVRLHNRIKSLNMVDSDDEDEEEEAVADTEKPSLLSVASSMRPRAHSRSK
SGTGAAAFQEVVLAAKRNKELLEKEKASKQDAAEEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG