YALI0E27624g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E27624g

Location

Species Yarrowia lipolytica Positions 3257871..3260336
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2466 (nuc.)
Previous locus YALI0E27616g Next locus YALI0E27632g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27624g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27624gYALI0E27624g_mRNA-001YALI0E27624g_CDS-001

Nucleotide sequence

 

>YALI0E27624g
ATGGACAAAGAACGGTACATTCAGCTGTGCTACAATGCCGTCAAGCTGCCTGATCAGTTG
GATAATTACCAGCACTATTACAACCTCTTTGATGGCTGGTCAACTAAGTTGATGGAATCA
ACCAAGCGTGAAGTCAACATCATAATCGACAGGAGACTCATGAAGGAAAACGTGGTGTCA
CTGATTGGGGTGGACGAATTGAAGGGTATTGATCTAGGTAAAGACGTTGTTAGACTGAAA
TTGGAACGCTTCGCAGTTCCCTGGGTGATCTTGGCAGCTCACGTCCTCTTGGGTTTCACG
ACAGACGCGCTTGAAATCGTGACCTCATTGGTGGAGACTTTCCATATCCACGGCATCCCC
GAGTCGATGGTAGAGCAAGTTGTTGCTTGGAGTCTTTATTCTATGGGCCTAGATTACACT
GTTGTTTTACACGATAGCAAGACTCGACACGACCAGTTGAAGTACGCAGCCGCGAACGCG
TCAAGACTGTCGGAAAAGCGGACGGAAATTTGGCGGGAAATCTTTGACCATCTTCATGAA
CAGAAGGCTTTCGCTCATCCAAAGGTCGAAGCCGGCGTGGTCTACTTTGCCCTGTTTCGC
TTGCCAGAAAATGCATCTCGTGGATTATATACCGTCTTATTCCTTGATGCTGCCACTGGT
GCTCTCGCTTTCACATCACCATTTCAACGGGAGCAGGAAGGGCTTGGGGCTATCAGTCGA
TATATCCGTAAGCATATCGATGTCTTTTTGAGAGAGCATGGCCAGCCAGCGTTCATGGTT
TGTGTCAATCCTTGGGATAGTGGAGAGAAGTACGCGTCGCTTGTGGGCGTTCTTCAGGAT
GCGGTAAAGGGACTTCCCCCTCTTTCCACGCATTTTTGCATCTACACGACTAGGGATGGA
GATATATTTTGCGACTTGCCTTCGACACTCGCCAACCTCCTTCTACATATCACTGAGAGA
CTGGAATCTGGGCTACAGAGACTCAAAGTTGATCCAATTCTATCATTCTATACCGAAAAG
GGCTCAACTGCCTGCTGGGAATACATCTTGGAGTCATCTTTTGGAGACCTTCTTCAAAGA
AAATTTCACACGAATCAGCCTGTTTCGTATTACCTTGGCAACAATGGCATGAACCCCACG
CCCTGTAGGTTGAGCTATGCCGTACCAGGTAAAGGGGCTACGATTTCCCTGACGGGCCAA
CACAGTTGGGATCGCCTCTATGTCTCTCCTTATTTGGATGTGGATGGTGGCGACATGACG
GTTCAACATGAAGCAGTGGAACATTTGGATGAATGTGATCAGGATGAACTTGACCGGCTT
CTGACTCTTTCTGCAAACTACTTTTTGCATGATGTTTCATCGGAATCTAACGTTGTGGGG
CTCCAAAAACCTTGGCACCAACTGCTTCTGTACATTTGGCGTGTGGCTGAAACGCCCAAG
ACCAGTCTTGAGTCCACGCTAGTGAGAACTACTCCTGTCGAAACCATACCTGTAGACGTT
GTGGATCGACAACTTGTGCTCAATGATGAGCCAAAGGGTGAGCCAAAGGGTAAGGCATTT
GACCCAACCGCGAGCTCAAAGAAGCCCCCCTCACCTGCTCGCACTCCTGCGGGAACTCCT
GTTTACTCGGCAGATGCGGCAGTTGCCATGATGCTTGGTCTAAAGTCTAGGATGAAAAGG
CGTGAGAGGGCACCTTGGGGACAATGTGGTATTAAGAAGGATGCAACTGCGAAGGATAGA
GCCTCTCCTTGGACAACGAAGGCCCTTGATGGAAAGAAGTTTCTTACTGCACAGAGGGTC
TCTCATGAACAGAGAGTCGCATATGGCAACATGTCTTCTGGTGAAAATGAAAACGCTCAT
GGGAATAGAATGCTTTCTAGGAGGGTTGAAGCTGCTGTTTCTGAGACATCTTCCTCGGCC
CCCAAGCATTCTCAGAAAGTCTCCCTAACTGTGGCAGATACCAAGTCTCCTTCTTTCAAT
GCGACCTCTACTGGAAAGGATCGAAAGAGGCAGGATCAAGCCATTGGCCATAAGAGATGC
AGTGTCGCGGCTTTCAAAGATAAAGGTTCCATTCTAGGAGGAAAGCTTGCTCAGCCCCGG
CCAGTTCCAAAGAAAACATTTCGAGTTCCTCTGGCTCATAATACGCCTGATATTAAGCCA
TCAACACCCGCTTCTCGGGTCCGCAGACTTTCTGTTCTAGAAGCTCTCTCTGAAAGGGCC
CTGGTCCAGAAGTCCGCTGATGACCCTGCCAGTCATACTACTGAGATGCCTGCCTGCCAT
TTAGCTATAAAGAAGCCTGTCAGCTATGCAGCGGCGACGAATTCTGTTACTGTGGCTTCT
TTCAAGAGGTCTGTTGACATGGCATTGAAGAAGTCTGTCCATAACACTCTTCCAGGGATG
CCCGAAGACTTTCAAAAAAGCACGTCGCCAAATCAAAGAAGACCGAGGACGGGGAGTCCC
AGGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27624g_CDS-001

Protein length: 822 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E27624g_CDS-001 MDKERYIQLCYNAVKLPDQLDNYQHYYNLFDGWSTKLMESTKREVNIIIDRRLMKENVVS
LIGVDELKGIDLGKDVVRLKLERFAVPWVILAAHVLLGFTTDALEIVTSLVETFHIHGIP
ESMVEQVVAWSLYSMGLDYTVVLHDSKTRHDQLKYAAANASRLSEKRTEIWREIFDHLHE
QKAFAHPKVEAGVVYFALFRLPENASRGLYTVLFLDAATGALAFTSPFQREQEGLGAISR
YIRKHIDVFLREHGQPAFMVCVNPWDSGEKYASLVGVLQDAVKGLPPLSTHFCIYTTRDG
DIFCDLPSTLANLLLHITERLESGLQRLKVDPILSFYTEKGSTACWEYILESSFGDLLQR
KFHTNQPVSYYLGNNGMNPTPCRLSYAVPGKGATISLTGQHSWDRLYVSPYLDVDGGDMT
VQHEAVEHLDECDQDELDRLLTLSANYFLHDVSSESNVVGLQKPWHQLLLYIWRVAETPK
TSLESTLVRTTPVETIPVDVVDRQLVLNDEPKGEPKGKAFDPTASSKKPPSPARTPAGTP
VYSADAAVAMMLGLKSRMKRRERAPWGQCGIKKDATAKDRASPWTTKALDGKKFLTAQRV
SHEQRVAYGNMSSGENENAHGNRMLSRRVEAAVSETSSSAPKHSQKVSLTVADTKSPSFN
ATSTGKDRKRQDQAIGHKRCSVAAFKDKGSILGGKLAQPRPVPKKTFRVPLAHNTPDIKP
STPASRVRRLSVLEALSERALVQKSADDPASHTTEMPACHLAIKKPVSYAAATNSVTVAS
FKRSVDMALKKSVHNTLPGMPEDFQKSTSPNQRRPRTGSPR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG