YALI0E27203g

Overview

Description similar to uniprot|P41948 Saccharomyces cerevisiae YNL142w MEP2 high affinity low capacity ammonia permease
Locus type CDS
Locus tag YALI0E27203g

Location

Species Yarrowia lipolytica Positions 3223878..3225338
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1461 (nuc.)
Previous locus YALI0E27181g Next locus YALI0E27225g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27203g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27203gYALI0E27203g_mRNA-001YALI0E27203g_CDS-001

Nucleotide sequence

 

>YALI0E27203g
ATGGCTGACGCTACCTCAACGCAAGCTCCCCTTCCGACCACTGGCAATGGAGGAGACTCC
CTCACACAAAACCTGAACGTCCCCTTCCTGGGTGCCGATATGGTCTGGATCATGACCTCT
TCGGCACTGGTCTGGATCATGATTCCAGGAGTCGGTCTGCTCTACTCTGGTATGTCGCGT
AAGCACCACGCCCTGTCTCTCCTGTGGGCATCCATCATGTGCTGTGCCCTCGTCTCTTTC
GAGTGGTTTTTCTGGGGTTACACTCTGGCATTCTCTCACAAGGCCGGAAAGTTCATTGGA
ACCATGGATAACTTCGGTCTTATGAATGTTCTCGCTGCTCCCTCTGTTGGCTCCTCTGCT
GTCCCCGATATCCTGTATATGTTCTACCAGGGCATGTTCGCATGCATCACCGGTATGCTC
ATGGTTGGTGGAGCTCACGAGCGAGCTCGACTCGGCCCCATGATGGTATATCTCTTCATT
TGGATGACTGTCGTCTACTCTCCTATTGCATGCTGGACATGGAACCCTAGTGGATGGCTC
GCCGTCCTTGGAGGACTTGATTTCGCAGGTGGAGGACCTGTTCACATGTCTTCCGGTGCG
GGTGCCCTTGCCTATGCTCTCTGGTGTGGTAAGAGACGTGACCCTGCTGTTGAGAAGCTG
CCTCACTACCGGCCCTCTTCCGTTACTTCCGTTGTTCTCGGCACTGTTTTGCTTTGGTTC
GGATGGTTCGGATTCAACGGTGGTTCCTCTGGTAACGCCTCCATCCGAGGCTTCTACGCT
GCCGCTAATACTAACCTTGCTGCTGCTTGCGGTGCTCTCGCTTGGATGTGTGTCGACTTC
TTCCGAAAGGGCCGAAAGTGGTCCACTGTTGGTCTCTGTTCTGGTGCCATCGCAGGTCTC
GTTGGCATCACCCCCGCCGCCGGCTTCGTCCCTATCTGGTCTGCTGTCCCTATTGGTATC
ATCACCGCCGTCTTCGCTAACATTTCTGGTGACCTTAAGAATCTGCTCCGAATTGATGAT
GGTCTCGATGTCTTCTCTCTCCATGGTGTGGGAGGATTCTGCGGCTCTGTTCTTACTGCC
TTCTTTGCTGCTGACTACATTGCCCATCTGGATGGTGCCACAGAGATCAAGGGTGGATGG
CTCAACCACCACTGGGCTCAGCTGGGTTACCAGCTGGCTGGTGCGTTTGCTACCCTCGGC
TACTCCTTTGTGGTCTCTTCAGTTATTCTTGTCATCATGAACAGAATCCCCTACCTCAAC
GTCCGAATGACCGAGGAGGAGGAGATGCTTGGAACCGACATGGCCCAGATCGGCGAGTTT
GCCTTCGACTGGGAGGACTCTGGAGTCCTGGACCTGCATGGCCAGAACCCCAATGGTATG
GGCGTCACCCCCAACGTCCAGACTCCCAAGCCCAGCAGCATCAACGAAAACAAGGAGGCT
GCTGAGAGTGATTCGGTTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27203g_CDS-001

Protein length: 487 aa.
Product: Ammonium permease involved in regulation of pseudohyphal growth, putative

>YALI0E27203g_CDS-001 MADATSTQAPLPTTGNGGDSLTQNLNVPFLGADMVWIMTSSALVWIMIPGVGLLYSGMSR
KHHALSLLWASIMCCALVSFEWFFWGYTLAFSHKAGKFIGTMDNFGLMNVLAAPSVGSSA
VPDILYMFYQGMFACITGMLMVGGAHERARLGPMMVYLFIWMTVVYSPIACWTWNPSGWL
AVLGGLDFAGGGPVHMSSGAGALAYALWCGKRRDPAVEKLPHYRPSSVTSVVLGTVLLWF
GWFGFNGGSSGNASIRGFYAAANTNLAAACGALAWMCVDFFRKGRKWSTVGLCSGAIAGL
VGITPAAGFVPIWSAVPIGIITAVFANISGDLKNLLRIDDGLDVFSLHGVGGFCGSVLTA
FFAADYIAHLDGATEIKGGWLNHHWAQLGYQLAGAFATLGYSFVVSSVILVIMNRIPYLN
VRMTEEEEMLGTDMAQIGEFAFDWEDSGVLDLHGQNPNGMGVTPNVQTPKPSSINENKEA
AESDSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG