YALI0E27071g

Overview

Description similar to uniprot|P35691 Saccharomyces cerevisiae YKL056c strong similarity to human IgE-dependent histamine- releasing factor
Locus type CDS
Locus tag YALI0E27071g

Location

Species Yarrowia lipolytica Positions 3209197..3209834
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 638 (nuc.)
Previous locus YALI0E27049g Next locus YALI0E27093g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27071g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27071gYALI0E27071g_mRNA-001YALI0E27071g_CDS-001

Nucleotide sequence

 

>YALI0E27071g
ATGATTATTTTCAAGGTGAGTATCGAACAATCGCATCACACGCGTGGTGCAATTGGCCAC
AGAGGCCGCCCATTGCGAGCCCCAAACTAACCGCAGGACGTTATTTCCAACGATGAGATG
TGCTCTGATGCCTTCGAGCCCAAGGTTGTTGACAATGTTGTCTACGAGGTCGACTGTACC
ATGATCCAGGTCGCTGAGGGTGACGTCGATATCGGTGCTAACCCCTCTGCCGAGGACGCC
GAGGAGGGTGTTGACTCTGACGTCCAGACCGTCAACAACGTTGTCCACTCTTTCCGACTC
CAGTCCACTGGATTCGACAAGAAGTCCTACCTCACCTACCTCAAGGGTTACATGAAGTCC
ATCAAGAACTACCTTGCTGAGAACAAGCCCGAGGAGGTCGAGAACTTCGAGAAGGGTGCC
CAGGCTTACGCCAAGAAGATTGTTGCCAACTTCAAGGACTTCGACTTCTACACTGGTGAG
TCCATGGACCCCGATGGAATGGTTGCCCTCCTCAACTACCGAGAGGACGGTACCACCCCT
TACCTTATCTTCTGGAAGCACGGTATCAAGGAGGAGAAGATCTAAGAAAATAGTAATAGA
ATTGATTAGTATTTGAGATTACAAAAAGAGCGTGTCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27071g_CDS-001

Protein length: 168 aa.
Product: Protein that associates with ribosomes, putative

>YALI0E27071g_CDS-001 MIIFKDVISNDEMCSDAFEPKVVDNVVYEVDCTMIQVAEGDVDIGANPSAEDAEEGVDSD
VQTVNNVVHSFRLQSTGFDKKSYLTYLKGYMKSIKNYLAENKPEEVENFEKGAQAYAKKI
VANFKDFDFYTGESMDPDGMVALLNYREDGTTPYLIFWKHGIKEEKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG