YALI0E27049g

Overview

Description weakly similar to uniprot|Q04781 Saccharomyces cerevisiae YMR247c similarity to hypothetical protein S. pombe
Locus type CDS
Locus tag YALI0E27049g

Location

Species Yarrowia lipolytica Positions 3203661..3208028
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4368 (nuc.)
Previous locus YALI0E27027g Next locus YALI0E27071g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27049g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27049gYALI0E27049g_mRNA-001YALI0E27049g_CDS-001

Nucleotide sequence

 

>YALI0E27049g
ATGAGGTGAGTACTCACAGAGACACTGTCAGCGTTACAACGCAACTAACCCAGTTTTGCA
TTTGGAAGCAGTGGAACGTCTTTCAACTCCGGTGTCTCCTTTAGCTACATCACTGGAGTT
CCTGATACAAAGGCCGTTACGCCTCCAGCACGAACGGTACTGTTCAAAAACCTGCTGAAA
CGAGATGCAAGCACCAGAGAAAAAGCCATCTCCGAGTTGCTGACCCAGCTCCAAGCCAAG
AACCCAGAGACCCTCGACAAGACCACATATTACGCCTGGATCCAGCTTTACGCTAAGCTA
GCTATCGACATTAGCCGAGTAGTACGAGATAAGGCACACCGATGCCAGGGATACATTTGC
AGCATTCTGGGTCCCCAGAGTGTTCCCCATTTGGGCGATGCCATCTGTCCTTGGCTTTTG
GGAACTGTCGATTCTGACAGACAGGTTGCTATGGCAGCCATGCAGTCTCTGGATATCGCC
TTCCCGGACCCTGAGAAGAGGGGCAAGTTTCTCAAGACATTCCGAAAGAGCTGTGTCACC
ACTCTGGTGGAAGCTCTCCGAACAGAGACAAAGGACTCACTTTCTGACGACCGATTCGTC
ACCAAGGAGGAGGCGGATGCCAAGTTCAACCGGTTCCGATCGTCCGGAATCGCTTTACTA
GGAAACTTGCTACCATTCAAGCAATCCGAGCTTGACGAGGGATGCGAGGACATTCTGCAT
GATGATAAACTATGGAACTCGGTCACCTCTGACGACTCTGCTTTGGCCCAAGCAGTTATC
ACCCTGGCTTCTAAGATGATCACTGACGACTCTCTGCATGAGACCTTCTCCAACACCCTC
CTTAGAAAGGGTCTTGGATCTATCAATCCCGGCTGCATCTCTACTTACACTAAACTTATC
ACAAAGCTGACCGTGACCAATCCAGAGATCTGGTCCATGGCCAAGAAACCCCTTACTCCC
CAACTGAGCAAGTACCTACGGACCTCAAAAGCGTGGAACGAGATTCCTGTTCTTATTGAG
GCCATCAACAGAACTTCCTTGGCTACAGATATGGACAAATTGATGGCTGACTTCCTGTCT
GGCGTCACTTCTGATGAATCACCAGGTGCATGGATCTGCTTCTTTGACACCATTGCGAAG
ATCGCCAACACCAGTCAGCTTGGAGCCGCCCTTTCTCAGCTCGGGAAGCTCAAGGAGATC
ATTCGACCCAGGGGGTTGTGTAATGCTACTCTCACTCCCACGGGTCAGATGTATCCTTAT
GTTTCTAACCTAGCTCGAGCATGCCATTCTGAGTTCGAGACAGCCTACAATGCCGCCATC
ACTCGAACTACCGAGAAGAAGGATTTCCTTACATTCGAGAAACTGATGCAACTCACTGCT
TTCTTGATGGAAGATGAACCTCTCCGTCCTATTCTTGGACCTGGTATTGAAGCTATCTTC
ACTTTTCCCGTTGAGAAGGCTACAAAGGCTCTGCTCTACCCCGTGAACAAGTTCCATCTT
CTTAGTGAGTCTCTTCAGAACAAGTTCATTGAGTTCACCATGGCTCTGCCTCTCCACTTT
ACTGCAGATAACGTCGGGCTTTTGCTCGACCTGGCCCAAGATATGGCTCGAAAGATGCCC
GCCGAAGATGTTGACAAGTTCTTTGCCATCACCACCGATAACATTGCAAAAGTGGAAGAC
ACTGAGACTCGACAGAATCTCCTGCATGCATTTGTCTCTTCCCACTGGCCTACTACGCTT
CCCGACTCTGTGGTCACCCTACTTGAGGGCACCCTGGACCACAGCTCTACAGCTCTTCTG
CTCAAAGGCTCTTTCACAGATGAACAGAAGAAGGCTCTCTTCTCACATTTTGAGGATGAC
CTTCTAGGCGATCCCACTGCTCTTGAGGATCTCTCTGATGGTGTTCTTACTCGACTGTGT
GACGGATTCCTCGTTGACAATAGAAGCATCCTCTTCGAAGACGTTATGTTCGAGCCTTTC
ATCGAGAAGCTGCTTGGAAAAATCGAGGAGCTTGAGTACACTAACAAGGAACTAGCCTCC
AAGCTGGCTGAGCAGTGTGTCAAGGCTGGACTCAAGGACTATCTTTTGAGCTCTGGAGTT
CGTGACTTCATTGCCGATCTGTCCAAGCGCGTGGCTGTTCCATGGCTTTTTGAGGCTTGT
CAGCTGTTTTTGACCAAGCTGCAGAACCTCCTGCAGTATGATCTGTCTCCATCTCTAACG
GTTACGTCCAAGTTCGGAGGAGCTGTTCTGTTTGAGCAGTTCGTTGGTCCTGATGAACTT
GCAGGTGTCAAACCTGAGCCTCGTCTCATTGACGAAGCCCTCGGCCTTTTTGGCTTCATG
TTCACCCTCGATAAGATCAAGCCTGTTGACGACACTCTAGTAGAGTATGTGACTGTTGCC
AAGAAGTACACTGAACTTAACAGTGTGACCACGGACTTTGATTTCGATCGGTACGCTGCT
TTTGCTTCTATGAACGCCCTATCGAATGATCTCAAGACCAAATTCGAGGACAACAGCAAA
CTCAACGGACCTGCCGCATTCTATTATGCTCAGATTGTCGCCGATACAACTGTTCCAGTT
GGTACCGTGAATGTGCGAAAGCTAGTACAGGAAGAAAAGTATACTGAGGCTCTGATTGAC
ATTGTTTCTCGATCCGAGGAGGATTTCCAACAGACTCTCAGCTACTTGGCTTCTGAGATT
CCTTCTGTTTCTGCCTTGGAGATTGAAGCAAAAAGCGGTTTCAACCGACTGGTTCTCATC
AATTGCATCTTCGAATGTTCCGAGTACGAACTTGACATACCTCTTCAGCGACTTAGTATG
ATGACCAACACTCTTTTCGACTGGTGTTTGGAGGCTGAGAATGCCTTTGAGTTGGACTTC
ATCCCGATTCGAGCTGAGATAGCCAAGCTCATCTTGCATCTTGAGGACCAGGATGTTTCG
CGAGACTTGTACGAGAAGTTCCTGTCCTTTGTTATTGAGGGTCTCAACATTCTGTCAAGT
TTGGATAAGGATACTATTGACGGCGATATTGCCGAGATTGTCGATGGCTTCCGTCTCCAG
CTGTTCAAGATTCTGGCTACCTACTTCAACAACAAGGAGACTAACCCTGTTCTGGCCGAG
GTCTGGAAGGAGGAGATTGACAGTGTGTGGGAGGATCTTGCCGGCCATTTCTGTACTTAC
GTCACTTCTCCTTCTCCCCTTGCCGTCAAGGTGGACCGCCTTCTTGGACGAATTGCTGTT
CACGTTCCGATCAAGTACTTTGAGCTCGACAAACTGTTTGGTGTTGTGGCTCGGTCTTCT
CCCGATTGCCAGTTTGCTGCTACCAAGCTTGCTCTTAAGATGATTCCTGACCAGCAGGAG
GAGCTCTCTATCAACGTTGAGCTTGCCAAGACTAAGGTTGCCAGTGAACATGACGATGAG
GACCACAACATCGACGTAACTCTTTCCCCTGAGCTGCGGTCCGTTGTTGAGTCTGCTGAG
CCTGGTTCTTCCCGGTTCCTTCTGGCTTGGATTCTCATCTTGGATCATCTCGATGCCTCA
TCTTATGCCATTAAGCAGGTGTACCTTGATCAGCTCAAATCTTCTGATGCTGTCAACGAC
ATGCTTACCTGCATTTCTGAGATGGTCCAGACCAACCCCTCTACCAAGAACCATACTGCC
TTTCCTAAGACTCTGGACCTCTCTGTTCTTGCAGCGCATCTTTATTACCGAGCACTGGTC
CATCTTGGATCTATCACCCGTCTGTGGTTCGCTGACATCAAGAAGCGATCTGTTGCTCTT
GCTGTCAAGGAGACCACTAAGAAGCACTTCTCCCCTCAGCTTATCGAAGACGAGATGGAG
CGAGTCGAGGAGCTTCTCAATAAGGCTTCTTTGGATGACAGCATGTCTGTGCGGTTCAAC
AAGCAAACACACGAGGTTCGAGCTACCTACCTTGTTGACGAGCAGAAGATGGAGATCTCC
ATTGTTATTCCAGATGACTACCCTCTGTCCGCCGTAACTGTTGAGGGCGCAGTTCGAGTG
GGTGTTCGAGAGAACAAGTGGCGAGCATGGCTACTGGCTTCTCAGGCCATTGTTGCCAAC
AAGAACGGTACTATTGTTGATGCTCTGGAACTTTTCAAGAAGAACATTTCTCTTCACTTC
TCTGGTGTGACCGAGTGTGCCATTTGTTATTCTATTTTGCATCAGGACAAGTCCTTGCCT
TCCAAGACTTGTGGCACTTGTAAGAACAAGTTTCACAGTGACTGTTTGTACAAGTGGTTT
AAGAGCAGTAACTCTTCCACCTGTCCTCTGTGTCGAAGCACCTTCAGCTTCCGAGTCGGC
AAGTAGTCCATGTATATATGTACTATTAATGAATTGTATTTTATAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27049g_CDS-001

Protein length: 1426 aa.
Product: Conserved hypothetical protein

>YALI0E27049g_CDS-001 MSFAFGSSGTSFNSGVSFSYITGVPDTKAVTPPARTVLFKNLLKRDASTREKAISELLTQ
LQAKNPETLDKTTYYAWIQLYAKLAIDISRVVRDKAHRCQGYICSILGPQSVPHLGDAIC
PWLLGTVDSDRQVAMAAMQSLDIAFPDPEKRGKFLKTFRKSCVTTLVEALRTETKDSLSD
DRFVTKEEADAKFNRFRSSGIALLGNLLPFKQSELDEGCEDILHDDKLWNSVTSDDSALA
QAVITLASKMITDDSLHETFSNTLLRKGLGSINPGCISTYTKLITKLTVTNPEIWSMAKK
PLTPQLSKYLRTSKAWNEIPVLIEAINRTSLATDMDKLMADFLSGVTSDESPGAWICFFD
TIAKIANTSQLGAALSQLGKLKEIIRPRGLCNATLTPTGQMYPYVSNLARACHSEFETAY
NAAITRTTEKKDFLTFEKLMQLTAFLMEDEPLRPILGPGIEAIFTFPVEKATKALLYPVN
KFHLLSESLQNKFIEFTMALPLHFTADNVGLLLDLAQDMARKMPAEDVDKFFAITTDNIA
KVEDTETRQNLLHAFVSSHWPTTLPDSVVTLLEGTLDHSSTALLLKGSFTDEQKKALFSH
FEDDLLGDPTALEDLSDGVLTRLCDGFLVDNRSILFEDVMFEPFIEKLLGKIEELEYTNK
ELASKLAEQCVKAGLKDYLLSSGVRDFIADLSKRVAVPWLFEACQLFLTKLQNLLQYDLS
PSLTVTSKFGGAVLFEQFVGPDELAGVKPEPRLIDEALGLFGFMFTLDKIKPVDDTLVEY
VTVAKKYTELNSVTTDFDFDRYAAFASMNALSNDLKTKFEDNSKLNGPAAFYYAQIVADT
TVPVGTVNVRKLVQEEKYTEALIDIVSRSEEDFQQTLSYLASEIPSVSALEIEAKSGFNR
LVLINCIFECSEYELDIPLQRLSMMTNTLFDWCLEAENAFELDFIPIRAEIAKLILHLED
QDVSRDLYEKFLSFVIEGLNILSSLDKDTIDGDIAEIVDGFRLQLFKILATYFNNKETNP
VLAEVWKEEIDSVWEDLAGHFCTYVTSPSPLAVKVDRLLGRIAVHVPIKYFELDKLFGVV
ARSSPDCQFAATKLALKMIPDQQEELSINVELAKTKVASEHDDEDHNIDVTLSPELRSVV
ESAEPGSSRFLLAWILILDHLDASSYAIKQVYLDQLKSSDAVNDMLTCISEMVQTNPSTK
NHTAFPKTLDLSVLAAHLYYRALVHLGSITRLWFADIKKRSVALAVKETTKKHFSPQLIE
DEMERVEELLNKASLDDSMSVRFNKQTHEVRATYLVDEQKMEISIVIPDDYPLSAVTVEG
AVRVGVRENKWRAWLLASQAIVANKNGTIVDALELFKKNISLHFSGVTECAICYSILHQD
KSLPSKTCGTCKNKFHSDCLYKWFKSSNSSTCPLCRSTFSFRVGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG