YALI0E26851g

Overview

Description similar to uniprot|Q9P748 Neurospora crassa Related to translation initiation factor 3
Locus type CDS
Locus tag YALI0E26851g

Location

Species Yarrowia lipolytica Positions 3183076..3184161
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1086 (nuc.)
Previous locus YALI0E26829g Next locus YALI0E26873g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26851g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26851gYALI0E26851g_mRNA-001YALI0E26851g_CDS-001

Nucleotide sequence

 

>YALI0E26851g
ATGTCGGAAACTCTTCAGATCAGCAGAGTCGCAGGCACCAACGGCGCCCCTACACACGTG
ACCGTCACCGCCCAGGCTCTTTTCCAGATCCTCGACCATGCTCTCAGACGCGAGGAGGAG
CAGTCCAAGGTCATTGGTACCCTTGTTGGTATTCGTTCCGAGGACGGCAGCGAGGTTGAG
GTGCGAAACGCCTACGCCGTTCCCCACTCCGAGTCCGAGCAGGAGATGACTATCGATCTC
GAATACAACCCCACCATGCTTGCTCTCCACCGAAAGGCCTTCCCCAAGGAAGTGATTGTC
GGCTGGTACGCTACTTCTTCGGAGCTCAACACCTTCTCCGGACTCATTCACGACTATTAC
ACTCAGCTGGATGGAACCCCCGCAATCCACCTGACTGTCGAGGCCGCCAACCTCGCAGAC
ACCCTTCTGCCCCGAACCTACGTGGCATCCGCCGTGGGCATCGATCCCAGCAAGAACTCG
GGCAACTGTGTCTTTGTGCCCATTTCTAACGAGGTCAAGTTCAACGACTCGGCTGACCGA
GCCGCTTTGGAGGCTATCTCCTCTGCCAGGGAGTCTCCCGAGCGAAGCATAAACCTGACG
TCCGATCTGGCCAACCTGGAGAACTCGCTGACCCAGGTGCTCGACATGCTGGAGCGAGTC
CAGACCTACGTTGCTCGAGTCATCAGCGGCGAGGAGTCTTCTGAGAAGGCCCAGCAGGTT
GGCAAGCAGCTGCTGTCCACTCTGACCCTGACTCCCTCTCTGGACGCCCAGAACCTCGAG
GCGCTTTTCAACTCTCACCTGCAGGACGTTCTCATGGTGGTCTACTTGGCCAACACCGTC
AAGACTCAGCTTCAGCTTTCTGCTAAGCTCACCACTCTGGTCTAAGCTGGTTAGTTAGAG
GGTACATTTGCACACATGCTGGAGGAGCATAACACATTGTATACATTAGGCATGTCATGG
TAAAACACATCTCCCAGCCGTGTCTATATACTTGGATAAAAGAATGGATTTCACAGAGTA
GAAAAGGAGACACTTGTACGAGTGTGTACTGTAGATACATGTACGAGTACATACTGTAAG
ACATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26851g_CDS-001

Protein length: 295 aa.
Product: Translation initiation factor 3, putative

>YALI0E26851g_CDS-001 MSETLQISRVAGTNGAPTHVTVTAQALFQILDHALRREEEQSKVIGTLVGIRSEDGSEVE
VRNAYAVPHSESEQEMTIDLEYNPTMLALHRKAFPKEVIVGWYATSSELNTFSGLIHDYY
TQLDGTPAIHLTVEAANLADTLLPRTYVASAVGIDPSKNSGNCVFVPISNEVKFNDSADR
AALEAISSARESPERSINLTSDLANLENSLTQVLDMLERVQTYVARVISGEESSEKAQQV
GKQLLSTLTLTPSLDAQNLEALFNSHLQDVLMVVYLANTVKTQLQLSAKLTTLV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG