YALI0E26807g

Overview

Description similar to uniprot|Q04418 Saccharomyces cerevisiae YDR527W RBA50 RNA polymerase II-associated protein RBA50
Locus type CDS
Locus tag YALI0E26807g

Location

Species Yarrowia lipolytica Positions 3178444..3180126
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1683 (nuc.)
Previous locus YALI0E26785g Next locus YALI0E26829g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26807g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26807gYALI0E26807g_mRNA-001YALI0E26807g_CDS-001

Nucleotide sequence

 

>YALI0E26807g
ATGGACGTTGGAGATATCATCGAGCGAGACATTGAAGACACACCGGCTCCCCTACCGCCC
ATGCCCCCAAAGGCTCCCAGCGCCTTCAAGCGAGAGTGGAAGCGAAAGCCCAAGCCTGCT
CCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCCGTCAACAACCAGGCACCGCCTGCAAAG
CCTACGGTAGCTGGACGTTTCCAGAACGACTATCCGTCGGATCAGAAGCTGACTGAAGCC
GAGGAGATTCATCTGGAGAACTTGTCAAAGCTTGCCAAGATGAGTCCTGAGGAAATTGAG
GCCCAGAGACAAGAGATCATGGAAAGCATGGATGAGAACGTGCTCATGGCACTCATGAGA
CGGGCCAAGATCAAGGAAGACGATATGGAACCTCCTCAACAGGAGCCGACCGTGGAGGAG
CCGGAGGAGGTTTTCAATAAGTCGAAGCCTGTCAAAGAAGAGCCACAGAGTGAACACGCG
AGGGAAGAGCCGACAATTACGGAAGTTAGGGATGATGTTAAGGCAGAACTTGAGCAGACT
AAAGAGACAAAGGAGGCTGAACGCTCTCTAGGAGATGACCTAAAATCGTCATTGGGAGCT
AGAGAGGTCAAACCTAGCGATATGGAGTCCAAGTACGATGTTGAGGATGAAGATGATGAT
GACAAACCTGCCACTACCCCAGGAACACCCAAGAAGGAGACCAAGACAGCGACTGCATCG
GAGATGGATTTTGATAGCTCTGCCACACCAAAGAAGGTCAAGTTTGAGGCAAAGGAGGAT
GGAGATGAAAAGGGTAAAGACAAGGCAGAGTCTCAGAAGTCTGGCGTTCAGGCAGTGCAT
TTTCCAAAGCCTCCCACATTCGCTGCTGACGATGAAGATCCCATGTCCATCGACGACGAA
GACTTTATGGAGAAACTACATGAGAAGTACTTTCCTGATCTGCCCAAAGAACCGTCCAAG
ATGGCATGGATGACCGATGCCAGACACAGAGTGGTTGAGGAGCGAGGACCCGATGGAGAA
ATGACTGCCAAGATCATTCAGGACACTTCAGATGCTCCACTGCCTAAAACTATGCTCCCA
TCTGAGATTAGATTCGACTTCAAAGGTAACATCATCACCCCCAAGACCTCTCGAAACATC
CCAATGAACCTTGGTCTGCATCACCATGGCGAGAACCCAGAGATGGCTGGATATACCATT
CCCGAGCTAGCTCAACTTGCGCGAAGTTCGGTGTCGGGGCAGCGATGTATTGCCATCAGA
ACCCTCGGACGAATTCTGTACCGTCTTGGAAACCCTACTGTCATGGAGAAGGAGTATGGA
AAGACCATTGGCATGGGTCTTAGAGGTCTCATTGACCAGGGACGAGTCATCGAATCAATC
ACCGAGGCCACCCATGCCAAGCAGATGAACGTTGCAGCATACGCTACCGAAGCTCTCTGG
CTGTGGAAACAGGGCGGAAGTGATACTCGACAGGCTAGTTAGAGTGGAGTGGGATAGTGG
AATAGTTAGTTATAGATAGGAATTCATTTATAGGTCATCATCAATATTATCTACAGTAAA
TATCACTTGTATATACTACTCAATTTAAAAATCATAATACATTATTACTAAACTGCACAA
CCAACTACAATCTATAACCATTGGCTGTGTTACTTTTTTTTTTTTTTTCTTTTTTTTTTT
CGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26807g_CDS-001

Protein length: 494 aa.
Product: RNA polymerase II-associated protein, putative

>YALI0E26807g_CDS-001 MDVGDIIERDIEDTPAPLPPMPPKAPSAFKREWKRKPKPAPAPAPAPAPAPVNNQAPPAK
PTVAGRFQNDYPSDQKLTEAEEIHLENLSKLAKMSPEEIEAQRQEIMESMDENVLMALMR
RAKIKEDDMEPPQQEPTVEEPEEVFNKSKPVKEEPQSEHAREEPTITEVRDDVKAELEQT
KETKEAERSLGDDLKSSLGAREVKPSDMESKYDVEDEDDDDKPATTPGTPKKETKTATAS
EMDFDSSATPKKVKFEAKEDGDEKGKDKAESQKSGVQAVHFPKPPTFAADDEDPMSIDDE
DFMEKLHEKYFPDLPKEPSKMAWMTDARHRVVEERGPDGEMTAKIIQDTSDAPLPKTMLP
SEIRFDFKGNIITPKTSRNIPMNLGLHHHGENPEMAGYTIPELAQLARSSVSGQRCIAIR
TLGRILYRLGNPTVMEKEYGKTIGMGLRGLIDQGRVIESITEATHAKQMNVAAYATEALW
LWKQGGSDTRQAS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG