YALI0E26785g

Overview

Description weakly similar to uniprot|A3LZZ9 Scheffersomyces stipitis mitochondrial carrier protein
Locus type CDS
Locus tag YALI0E26785g

Location

Species Yarrowia lipolytica Positions 3175939..3177578
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1640 (nuc.)
Previous locus YALI0E26763g Next locus YALI0E26807g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26785g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26785gYALI0E26785g_mRNA-001YALI0E26785g_CDS-001

Nucleotide sequence

 

>YALI0E26785g
ATGCAGAAAATCGAGCCCGGCGACGTTCCGGGATTTCTGCCCGAGGTTCCGGAATTCACC
GAACCGCACGAAAACAATAACGAAGCATGGAAACCAAGCTCGGCCCGGATTATTGGAGCT
ACGACGGCCGGTACTCGGGCGCTCGCATCCCAGCTCTTCACATTTTACATCCGTGTGCCT
GTCAAGCTCTTTCGACCTACCAGAGTCGACTACTTAGCGCTTCCACGGGCGCTGTCTCCA
AACAGCGACAAACCTTGGAGCTTCAAAACACACAGCAGTCCGGCTCTGATTGCCAACGCA
GTCAAACAGCATGGCTGGGGTTTTATTCCAAATCAATTGCTGCCCCCCTTATTGGCGAAC
TCGGCCGTAGGACTGGTATTGTACTCCACATATCTGGGATGTCTACCATTATTCAAATCA
GAGAAAGACCGACAAAAGGAGGATGAAGAAGACGAACACCAACGACAACTGCTGCTAAGG
AAATCATGGTATGATACCCAGGGAATGGACGGCTCGCATGTGAAATACATCATCGATGAA
CTCATGCCTCATCGATACACGTTCAAACAGACGTTTTGTGCCGGAGCAGTCGCTGGAGCA
GCCCAGGCAGTAGCTGCAGCACCAATCGACGCCATCTACAGGCGTTCTTCGATAGCAGAA
GTGCTCAAGACCAAACAGTTGCCCTCTATGTGGTCCTATGGAATGGAGAAGTTGCGCCAA
ACAGGTGCACCAGGTGTCTTTGCTGGCTTTACGTTGTCAGTTGTCAAAGAGAGTCTGGGT
TTTGGGGTCTTTTTTGCCACGTTCGAAATGGTTAAGGGATCGTGGTACAGGTCCTATGCC
AAGTGGCTGTATGCTGATCGTCTCAAGGAACATCCTTCAGGCTTTGATGAGAATGGAAAA
AGCATCGTCAACAAGGTCCTAGCACCTTTCAGCATCCTTGTAGCTGGAGCAGCAGCCACC
ATCTCACTGCATGTGGTTCAGTTTCCTCTTCAGAAGCTGCAGGGCATCTACCTGACTCGT
CTCGATACTCAAGACCTCATTGACGCAAGAAAACAACTGGAAGCTAACCGATCCAAGGAG
CAAAAGACACAGAACAAACTTGGAGAGCGAATAAAACATCAGGCCAGTCCCGCCTCTCCT
TTCCAGTCAACATTTCTATGCTACGAGCGTCGGATTCACCACAGAAACCCTCTTATGGTG
GAACTGTCTGAAACGCTGGAGGAGACTCTTCCCAGAACGCATTCACTTCTTGTGAAGTTT
GGTAAGGGATGGAGTAAGACCGTCAACTTTTCTATTAGATGTTTTACTACTCTTAGATAC
AGAATCTTCCCGGGTATCCATCTCTACTACCGAGCCTACGTTGAGACTCTGCATACAGCC
AATAACATCCGAAAGGGTCTGCGGTTGAGTTGGCCCAGATACCTATACCATGGTTGTGGC
TGGACGACCCTCAGTGCGCTTCCGTCTACGTCTATCGGTCTGTTCGTGTTTGAAATCATG
AGAATTCGATTTGGCCAGGAAGACGACCCACCTATGAAGGTGTTTGAGGACTAAGCATTT
GTATATTGAACCCGTACATAACAGCAGCACATGATAAATATGTGCTAATAGCATAGATAG
AATAGATAACACTAATTAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26785g_CDS-001

Protein length: 518 aa.
Product: Conserved hypothetical protein

>YALI0E26785g_CDS-001 MQKIEPGDVPGFLPEVPEFTEPHENNNEAWKPSSARIIGATTAGTRALASQLFTFYIRVP
VKLFRPTRVDYLALPRALSPNSDKPWSFKTHSSPALIANAVKQHGWGFIPNQLLPPLLAN
SAVGLVLYSTYLGCLPLFKSEKDRQKEDEEDEHQRQLLLRKSWYDTQGMDGSHVKYIIDE
LMPHRYTFKQTFCAGAVAGAAQAVAAAPIDAIYRRSSIAEVLKTKQLPSMWSYGMEKLRQ
TGAPGVFAGFTLSVVKESLGFGVFFATFEMVKGSWYRSYAKWLYADRLKEHPSGFDENGK
SIVNKVLAPFSILVAGAAATISLHVVQFPLQKLQGIYLTRLDTQDLIDARKQLEANRSKE
QKTQNKLGERIKHQASPASPFQSTFLCYERRIHHRNPLMVELSETLEETLPRTHSLLVKF
GKGWSKTVNFSIRCFTTLRYRIFPGIHLYYRAYVETLHTANNIRKGLRLSWPRYLYHGCG
WTTLSALPSTSIGLFVFEIMRIRFGQEDDPPMKVFED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG