YALI0E26609g

Overview

Description similar to uniprot|P23292 Saccharomyces cerevisiae YNL154C (ohnolog of YHR135C) YCK2 casein kinase I isoform
Locus type CDS
Locus tag YALI0E26609g

Location

Species Yarrowia lipolytica Positions 3159825..3161289
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1465 (nuc.)
Previous locus YALI0E26587g Next locus YALI0E26620t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26609g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26609gYALI0E26609g_mRNA-001YALI0E26609g_CDS-001

Nucleotide sequence

 

>YALI0E26609g
ATGTCTCACCATCAATCATCCAACGTGGTGGGCGTCCACTACCGAGTGGGCAAGAAGATC
GGAGAAGGATCATTCGGCGTCATCTTCGAAGGAGCCAACCTGCTTAATACTCAGCAGGTG
GCCATCAAGTTCGAGCCCCGAAAGTCCGAAGCCCCCCAGCTCCGAGACGAGTACAGAACA
TACAAGCATCTGGCCGGCTGTGTAGGCATCCCCAACGTCTACTACTTTGGCCAAGAGGGC
CTGCACAACATCCTGGTCATCGATCTGCTAGGCCCGTCACTCGAGGATCTGTTTGACTGG
TGTGGCCGACGATTCTCCATCAAGACCGTCGTCATGGTTGCCAAGCAGATGCTGTCACGA
GTACAGACCATCCACGAAAACCATCTCATCTACCGAGACATCAAGCCTGACAACTTCCTG
ATCGGCCGAGAGGGCACCAAGACAGCCTCTCTCATCTACGTGGTTGACTTTGGAATGGCC
AAGCAGTACCGGGACCCCAAGACCAAACAGCACATTCCCTACCGGGAACGAAAGTCGCTG
AGCGGAACAGCACGATACATGTCCATCAATACGCATCTGGGACGAGAGCAGTCGCGACGA
GACGATCTCGAAGCCCTCGGACACGTCTTCATGTACTTTTTGCGGGGCGGTCTGCCTTGG
CAGGGTCTCAAGGCTGCCACCAACAAGCAAAAGTACGAAAAGATTGGCGAAAAGAAACAG
ACGACACACATCAAGGATCTGTGTGACGGCTTCCCCGAGCAGTTTGAGCAGTACCTATCG
TACGTCCGTGGCCTGGGCTTCGAGGAGACCCCTGACTACGACTACCTGCGGGCCCTGTTC
ACTCAGGCTCTCAAGTCGACCGGCGAGACCGAAGACGGAGTCTACGACTGGATGAAGCTC
AACGGCGGCAAGGGCTGGGATTCGGGCAACAGAAAGCCCAATCTGCATGGCTATGGCCAC
GCCTACCCGCCAGACCGGTCCGGCAACGCTAACTCGCGACAAGCCCACATTTCGTCTGCG
CGACTTAATGCCACCCCTCCTCCCCTGCCCGAGCCCGCTGCTGTCGCCCGCCAGAACTCC
AAGGGTCGACATGGCGCCCGTAACCCTCAGGCCCGACTGTCCAAGAATGCCCAGACTCCC
GGCTACTACCAGCAGTCACCAAGCCAGAGTCACGGCGTGCAAGGTGGTGCTGGCGCTGGC
ACTGGAGCCATGAGCTCGCAGCAGAAGCAGTCCAGCGTGCACCAGCAGCTGTCACAATCT
AACCAGGCTAACTATAACCAGGCCACGGACCCGGCCAACGCCGAATACGAGGCCCCCAAG
AAGGGCTTCTGGGCCAAGATCTCCGGCTTTTGCTGCGCTTAGACGCCAGCCCCGGCCCAC
TCATGTGAAGAGCAGGATCGTATAAGTAAATTATATATAGTAGGGAGACTCCACAAATTT
TGTAATGTATTGATGTTTTGACGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26609g_CDS-001

Protein length: 454 aa.
Product: Palmitoylated plasma membrane-bound casein kinase I isoform, putative

>YALI0E26609g_CDS-001 MSHHQSSNVVGVHYRVGKKIGEGSFGVIFEGANLLNTQQVAIKFEPRKSEAPQLRDEYRT
YKHLAGCVGIPNVYYFGQEGLHNILVIDLLGPSLEDLFDWCGRRFSIKTVVMVAKQMLSR
VQTIHENHLIYRDIKPDNFLIGREGTKTASLIYVVDFGMAKQYRDPKTKQHIPYRERKSL
SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGGLPWQGLKAATNKQKYEKIGEKKQ
TTHIKDLCDGFPEQFEQYLSYVRGLGFEETPDYDYLRALFTQALKSTGETEDGVYDWMKL
NGGKGWDSGNRKPNLHGYGHAYPPDRSGNANSRQAHISSARLNATPPPLPEPAAVARQNS
KGRHGARNPQARLSKNAQTPGYYQQSPSQSHGVQGGAGAGTGAMSSQQKQSSVHQQLSQS
NQANYNQATDPANAEYEAPKKGFWAKISGFCCA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG