YALI0E26587g

Overview

Description similar to uniprot|P38786 Saccharomyces cerevisiae YHR062c RPP1 required for processing of tRNA and 35S rRNA
Locus type CDS
Locus tag YALI0E26587g

Location

Species Yarrowia lipolytica Positions 3155081..3156109
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1029 (nuc.)
Previous locus YALI0E26565g Next locus YALI0E26609g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26587g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26587gYALI0E26587g_mRNA-001YALI0E26587g_CDS-001

Nucleotide sequence

 

>YALI0E26587g
ATGATCGATCTGAACATCCCGTGGCCTGTATCTGGCCCCAATGCCGCGTCGCCGTCCGAT
AGAGCCAAAATATCCTCCGCCAAGGCATCCATTTTGTTTCTACAGGAGCTGGGGTACAAG
GCCGTGGCTCTCAACTGCATCTACCAGGGAAAGATTCCCGCTACTCTCAAATGTCCCGTC
CCCGACGAAATCCACAAAGAGTTCCCGGATATACGCATCTACACGCGAGTGACCATTGTT
GCCGAGGACCTCAACCACAGCTTCAACCTTCCCAACCTATACCAGCAGTTTGATATTGTG
GCCATCAGACCCATGTCGGAAAAAATGCTCCAGGCCGCCTGTACCAATCTGGATGTCGAC
ATTGTGTCGATGGACATGACTCGCCGTCTGCCATGCATTCCGAAACACAAGACCATCGGA
GCTGCTACTGAAAGAGGCGTCAAAATCGAGGTTGTTTATGCACCGGGTTTGTCCAGTGAT
CCCCTGGCCAGAAAAACATCGATTGCAAACAACTCGTTGGTAGTGAGAGCAGCCCGGTGT
CGAGGACTTGTCATTTCAAGCGAATCTCTGTCCAGCCTGAGTCTCAGGGGCCCTTTTGAT
ATCATGAACTTGAGCTACATCTGGGGTCTGAACTCGGCTAGAGCTAGAGAAGCTGTGAGC
AAGAACCCAGAGGCGGTCATTCGAAACGGACTGCTCAGAAAGAAGAGTTATAAGCAGGTG
GTGATTGCAGAGCCGGAGGAGGTGAGAGAGCCGTTGAGGAAGAAACAGAAGGTCTAAAGC
ATGCACTCATGAGTGTAGTAGGCTGTTTTGCCGCTGCTAAAATGAACACATCTCTTGTAG
CTGGCGTCACATGCAGACAGCATCATCTAGCTACAGGTATTGGGTATTCATATTTGATCC
TGAAACTGGGCGAAGACTAATGAAAAAAGGAACATTCCCACACCAAACTGCCAGGAAAGA
CAGATAATGCATCACAGAAGGGGAAGAACATTAACGACATAGAATTATGATTCATTTATA
TTATATACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26587g_CDS-001

Protein length: 259 aa.
Product: Subunit of both RNase MRP and nuclear RNase P, putative

>YALI0E26587g_CDS-001 MIDLNIPWPVSGPNAASPSDRAKISSAKASILFLQELGYKAVALNCIYQGKIPATLKCPV
PDEIHKEFPDIRIYTRVTIVAEDLNHSFNLPNLYQQFDIVAIRPMSEKMLQAACTNLDVD
IVSMDMTRRLPCIPKHKTIGAATERGVKIEVVYAPGLSSDPLARKTSIANNSLVVRAARC
RGLVISSESLSSLSLRGPFDIMNLSYIWGLNSARAREAVSKNPEAVIRNGLLRKKSYKQV
VIAEPEEVREPLRKKQKV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG