YALI0E26257g

Overview

Description weakly similar to uniprot|P53120 Saccharomyces cerevisiae YGL140c
Locus type CDS
Locus tag YALI0E26257g

Location

Species Yarrowia lipolytica Positions 3112451..3116457
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 4007 (nuc.)
Previous locus YALI0E26235g Next locus YALI0E26279g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26257g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26257gYALI0E26257g_mRNA-001YALI0E26257g_CDS-001

Nucleotide sequence

 

>YALI0E26257g
ATGTCGCAACTATGGGCCAAGTGGAAAAGCCGGCCCCCTAAAATCAACCTCCTCGGCGTG
GAGTTTGCATGGGATGACCTGACGCTCAAGCGGCTGGTAAAAACCTTTGTCAACACCACC
TTTTGTCTGATTTTCTGTCTCATTCCGGCCTGTGTGCACCGAATCGGAAAGGTAGGCTAC
ATGTTGACTCTGTTTTCCGTGATTGTTCCGCCGGCAAAGCGACTGGGAAAGGAGGTTGAG
AGTATCGTCATTACTCTGTTGGGCCTGGGTCTGGGTGTAGGATACGCCAACCTGACACGG
TACATCGCCAAACTACCATTACGACATATGGAACTCAAGTCAGAGAAGGGTCTGAGTGGA
AACCCAGACTATAGAAGCGCGCTGGGAATTTTGGCGCTGGGCGAGTTTCTCATGCTCATG
TTCCATGGATATTGGCGGTCCAAGATCCCCCGTATCTTTGCAGGGGTACTAACCTTCCTT
ATCGTCACACATTTCTCCTACCTGTCCGATCTCGAGGTGTCTGTGCAGAACATGTGCATC
AACTTTGGCTATCCAATCATGCTGGCGTGCGGTACGTCGATTTTTTTCAATGTGACCATC
TTCCCCGAGTCGGGTTCTACGGACCTTGGAAAGGTCACGGTGGCTCTCATTAAGGAACTC
AAGACGTCCATCTCTATGACAGTTACCTACTTTGTCAACTCGGCCGAAATCATGCGAGTC
CATTTGGAGGAAGAACAGAGGCGGGAACAAGAGGCTTCCAACGGAGGAGCAGAGTCGCCG
AAATCGATCCATGGAAACACAGACGATTCCAACGAGACCCCAGAGACGTATGTTCCGGAG
TCTATTCACGACAACACCAAAATCGACAACAATCAGTCCCAGGCATCTGTATCCCCTGAA
CTAGACATTACAGAGCTCGGAACTCTGCTGAAAAAGAAGACAGCTCTCACAGCCAAGTAC
ACGTCGTGCAAGGCTGCCCTGACAGAGTGCACGTTCGAAATCACCTATGCTTACGTGTCT
CCCACGGTTCTGAAACCCACAGTCAAACTGTTGAACGGCATAGTCAAGTCTGCGGGTGCC
ATGTTGGATGCCTGTGAGCTGGAATTTGCACTGCTCGGAAAAGTACAGGCTGCTCAGCTC
CAAAAGACAAACAGTAGCTCTAACCAGGCGGCCGAGGAGGAGCAGGATATTATCAAGCGT
CTGAAACCCGAGCGAGAAATCGTGCATGGAAACAAGGAGCTCCTCCTAGCCATGGTTTCT
CGAGTCGCAGAACCCATCCATGTGCTCGATAAGGCCATGACTGACGCGTTTGACCATGCC
GTTCACGCTGTTTGCTACGCATTTTCCGTCGGAGAGCAGCTGCCCAATATTCGTGACTTT
CCAGACAAACGGGAGGAGTTCAAGGACGCCATTGAGACTTTCGACGTTGTGTCTCGGTCC
GCACTGGCGTCTCTGGACTTTGGTACTGTCGATCACGACCACATTGACGACTATCTTCTT
CCCCGAGACGAGCTGTTCCTCCTCGCCTCTTTCATTCTTAACCTCAAGTCTTGTGCTTTG
AGTATCATGAGCTTGCTTGACGAAGCCCAGGCTCTGCATGCTACACGTCGCAAGCGAGAA
GACGTGCGTGGATGGCCTATTTTAGGCAAAAAGCGACTGTGGTCGGCGATGTTCGAGAAC
AGAAAGAGCTTCTCCAAGTACTTTTTCTCGCGATCAGATGACGCCAGAAACGACGGAGAT
AACATTGAAGGACACGATGTCTTGACATTCACACAAAACCTGGAGACTAGAGAAGCTGCC
ATCACACGTCAAATGTCCAACACTGACCAGCCCAAGGATCTGAAGGAAGCCCAACCTGCT
TCTGAGAAGAAAACAAAGGAATCGCATTATGTGCGGTTCCGCAACAAGTGGAAAATGTTT
GATTTATGGATTGGAAACCACATTGCCAACATTATCGAAGTCACTCCTGCAGAAGAGAAA
CACTGGAAATTTGCTCTCAAAGTGACAATCCCGATGTTTCTCGTATCCTGGCCCATGTTT
GTGCCTTCCATGCGGCTGTGGTACATCAACATGCGAGGCTCTTGGGTCGGTTTTGTGGTT
GCCCTGGTTACGGAGACGACTCTGGGAGGCTCCGTTTTCATTTTCATCCTCCGAACAATC
GGATTAACTATTGGGTCGGCTTGGGCTGTTCTGGCCCATACTGCTGGACGAGGTCACATT
CACTCAGTTATGGGAGTGGTCATGGCTGTCATCTTTATCCCTGCCCTATGGTTCATGTTG
GCCACCAAATACTTCAAGGGAGGCATGATTACGGTTGTGTCTGCTAATGTGGTCCTTCTG
GCCACTCTATACCCTACGACTACAGGTGGAATTGTCACCAACTTTGCCAAACGAACTCTG
GCTATGATGATCGGAGGAGGAGCGGCTCTATTAGGACAATTATTCTTATTCCCAGTTAAG
GCGCGAGAAGAGCTCGTGGTGGTGACCGTCCAGGCGATCAGAGAGTGTTCTCGAATGGAG
AGAATCATTGCTTACGGCTTTGACGACCCTGCCACTGCTCAGAAGGAGTTCAAAAAGTGC
GCTAAGGTCGCCAGAGGTTCACTTACAGCTGCAGCGACCTTCAGAACTTTCACCAAACAG
GAGCCTCGTCTTAAGGGCTCTTTTGAGGAGATTTCCAAGATATTTGGCGAGATCATTTTC
GTGACTCGACAGATTATCGACCGACTGGAGAACATTGTCTTCTTACGTCAACAGTATGGA
TCTGTGGTTCTGGACGAGTATGGACCTGAGGTTCTGGCCTACCGACGTCAGACTGCCGCT
GCAATCACCACGACTCTACGTGCAGTTGAAGCAGCTCTTCTGAATAAGACACCCCTGCCT
CAGTATATGCCCAGTGCTCGTTTGGCGCATCGACGGTTTGTGAACCGAGTTCGAGAGGTC
ATGATCACACGACTGAGCCAGAACAAGCATCATCATAGCGTTCCCAATATTGGAACTCCA
GCGGTAGGTACACCTCGTGACACACCTCGAGAGACCCCCCGAGAAACCCCTCGAGAAACC
CCCTTGGCCACTCCTCTAGGCAATCCTTCGCACCCTGAGTTATCTTCTCGAGCCAGTCTT
CCCAATGTTCATACTGGGTCTCCTAGACGATGTTCGGAAGGAGACACCACTCGAGAGAAG
GCTTGTGTTCCTGATTTGGTGGTCAATGATACAGACACACCCCATGCTCTGCACCACAGT
TCTGATGACACTTCAGACTCGGATGACTCGTCTCAGGAGATTGAGATTGTGCCTCGAGCC
CGAACACAGCAGCAGCAGCAGCAGCAGCCACACGACTACCTCCAACATCGAGCCGTCGTG
TTGCAGCAAAAGTTCATGTCGTGGAGTGCGACTTCTTCGGCCGTGGAGGAGGTCATTGAG
TACGTGGAAGAGTTGGCTGATCTCACAGCGCTGCTTGTGGGTGTCAACAAATTCAAGTAC
GGCTTTCTTTCGCGTCCCATTTACGCTGAATGGGCTGCTTCGGCAGCTCGTGCTTACGAC
GAGGTTCTGGCTCCCCACGATCCTCTCAAGGCTGACAACGACGATGAAGAACCTGACGAG
ACACCCCATGAGCTACGAACGGCAGCTGATCATACTCCAGACATTCTGGATCGAGATCAT
ATCCCAAGAGGCCTTCGAAAGCGGGTCTTTTCTGTCGTGGAACACAATGGACAGATCTAT
GGAGGAGGCGAGCACCAGTACAACATGGTTCCAGGCATGCCTGCAGTTGACCGAACGACT
TCTAGACAGTCTCAAAAGTCAAACAAGTCGCACTTATCGCAGCCGGTTGCTCGCAAGACC
TCCAGTAATGCCTCCATGCCTCCTCTTACACGACGGCAGTCTATTCGGTCTGTGGTTGGA
GCTGTCAATGACAGTCCGGAGCCCGAGAGTAAGTACTTGACATTGAGACGGCGAATGGGA
CGCAAGATTAACAAGAAGCATTAGCATAATTATTTATTTGTTTTGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26257g_CDS-001

Protein length: 1328 aa.
Product: Conserved hypothetical protein

>YALI0E26257g_CDS-001 MSQLWAKWKSRPPKINLLGVEFAWDDLTLKRLVKTFVNTTFCLIFCLIPACVHRIGKVGY
MLTLFSVIVPPAKRLGKEVESIVITLLGLGLGVGYANLTRYIAKLPLRHMELKSEKGLSG
NPDYRSALGILALGEFLMLMFHGYWRSKIPRIFAGVLTFLIVTHFSYLSDLEVSVQNMCI
NFGYPIMLACGTSIFFNVTIFPESGSTDLGKVTVALIKELKTSISMTVTYFVNSAEIMRV
HLEEEQRREQEASNGGAESPKSIHGNTDDSNETPETYVPESIHDNTKIDNNQSQASVSPE
LDITELGTLLKKKTALTAKYTSCKAALTECTFEITYAYVSPTVLKPTVKLLNGIVKSAGA
MLDACELEFALLGKVQAAQLQKTNSSSNQAAEEEQDIIKRLKPEREIVHGNKELLLAMVS
RVAEPIHVLDKAMTDAFDHAVHAVCYAFSVGEQLPNIRDFPDKREEFKDAIETFDVVSRS
ALASLDFGTVDHDHIDDYLLPRDELFLLASFILNLKSCALSIMSLLDEAQALHATRRKRE
DVRGWPILGKKRLWSAMFENRKSFSKYFFSRSDDARNDGDNIEGHDVLTFTQNLETREAA
ITRQMSNTDQPKDLKEAQPASEKKTKESHYVRFRNKWKMFDLWIGNHIANIIEVTPAEEK
HWKFALKVTIPMFLVSWPMFVPSMRLWYINMRGSWVGFVVALVTETTLGGSVFIFILRTI
GLTIGSAWAVLAHTAGRGHIHSVMGVVMAVIFIPALWFMLATKYFKGGMITVVSANVVLL
ATLYPTTTGGIVTNFAKRTLAMMIGGGAALLGQLFLFPVKAREELVVVTVQAIRECSRME
RIIAYGFDDPATAQKEFKKCAKVARGSLTAAATFRTFTKQEPRLKGSFEEISKIFGEIIF
VTRQIIDRLENIVFLRQQYGSVVLDEYGPEVLAYRRQTAAAITTTLRAVEAALLNKTPLP
QYMPSARLAHRRFVNRVREVMITRLSQNKHHHSVPNIGTPAVGTPRDTPRETPRETPRET
PLATPLGNPSHPELSSRASLPNVHTGSPRRCSEGDTTREKACVPDLVVNDTDTPHALHHS
SDDTSDSDDSSQEIEIVPRARTQQQQQQQPHDYLQHRAVVLQQKFMSWSATSSAVEEVIE
YVEELADLTALLVGVNKFKYGFLSRPIYAEWAASAARAYDEVLAPHDPLKADNDDEEPDE
TPHELRTAADHTPDILDRDHIPRGLRKRVFSVVEHNGQIYGGGEHQYNMVPGMPAVDRTT
SRQSQKSNKSHLSQPVARKTSSNASMPPLTRRQSIRSVVGAVNDSPEPESKYLTLRRRMG
RKINKKH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG