YALI0E26125g - CWP12

Overview

Description uniprot|Q6C4K0 Yarrowia lipolytica YALI0E26125g CWP12 GPI-anchored cell wall protein, putative
Locus type CDS
Gene name CWP12
Locus tag YALI0E26125g

Location

Species Yarrowia lipolytica Positions 3103982..3104936
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 955 (nuc.)
Previous locus YALI0E26103r Next locus YALI0E26147g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26125g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26125gYALI0E26125g_mRNA-001YALI0E26125g_CDS-001

Nucleotide sequence

 

>YALI0E26125g
ATGCAGTTCTCAGCCGTCCTCCTCGCCACCGCCGCCTCCATGGTCTCTGCCCAGCAGTTT
GGCATCATCGCCATCCGATCTGGTTCCGACATCCAGAACTCCGCCGTCTACTCCAACGGT
GAGAAGCTCGTCATCGGCGGCACCTACCAGTCCACCGACTACGAGGTCAAGGACATGCTC
CTCCTCGCCAACGGCAAGCCCGTTCAGTTCGGCAACGGCGCCAACATCGTCGATTCTGAG
GGTGCCGGAACCCGAGATATTGAGGTCAACGGCCAGGACTACGTCTACGTCCCCAAGTTT
GAGTGGACCGCCTGCCCCGCCCCCGAGGGTGCCGACTACGTCTACACTGTCGAGACCTCA
AGCGTCTGCGGTGAGGCCGGCATCCCCTTCGCTCCCCGAGCCATGTACAAGGACGAGGCT
GCCACTGAGGAGAAGCCCGCCGAGACTGAGGCCGCCCCCGTCGAGACCCCCGCTATCACT
GAGGCTCCCGTCCCCGTCCCCACCGGAGGTGCCGTTGTCACTGCCAACTCCACCATCGTT
CTCACCATCACCGACTGCGGTGAGGGTGTTGAGTGCGTCACCAAGCCTCAGCCCCAGCCT
ACCCAGGTTGAGGAGGCTCCCGAGCAGGCCAACGGTGCCGCTGCTCTCGGTGTCTCTGCC
GGTATTGCTGGCATCGCCGCCGTTGCTATGCTCCTCTAAGCGCATCTTTTTGATTTTGCT
ACTTAACAGAAATACCCCTTTGAAATATTATTACTAACTGTATGAAGACCACTGTACAAG
CAGAGTGATTCACAGTATGGCAACACAATTCATTAGCTGTGCATAATTACTGTATGAGTA
TAAAGCTCAGTTAATCTACTGTATTTTAGTCTTGTGAAGTGTTGCTAAGGCTCATTGACC
TTAGCTTATTTTGGAGTCTACTGTAGGGTGTACTGAATGTATAAGAACAGAAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26125g_CDS-001

Protein length: 233 aa.
Product: GPI-anchored cell wall protein, putative
Gene: CWP12

>YALI0E26125g_CDS-001 MQFSAVLLATAASMVSAQQFGIIAIRSGSDIQNSAVYSNGEKLVIGGTYQSTDYEVKDML
LLANGKPVQFGNGANIVDSEGAGTRDIEVNGQDYVYVPKFEWTACPAPEGADYVYTVETS
SVCGEAGIPFAPRAMYKDEAATEEKPAETEAAPVETPAITEAPVPVPTGGAVVTANSTIV
LTITDCGEGVECVTKPQPQPTQVEEAPEQANGAAALGVSAGIAGIAAVAMLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG