YALI0E26081g

Overview

Description similar to uniprot|Q04311 Saccharomyces cerevisiae YDR049w
Locus type CDS
Locus tag YALI0E26081g

Location

Species Yarrowia lipolytica Positions 3099215..3101094
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1880 (nuc.)
Previous locus YALI0E26059g Next locus YALI0E26103r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26081g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26081gYALI0E26081g_mRNA-001YALI0E26081g_CDS-001

Nucleotide sequence

 

>YALI0E26081g
ATGGCAAAAGCAAAGCAAGCACCTACGGCATACTTTCTGTACGACCTGCCTGAGTCTATT
CTCAAGTCTCTCAAGGTGTATGATTTCAACGGAGTACTGCGATCTGAAGAGACGGAAGTT
AAGCCATCGAGCCAGTTTTCTGCTGAAGAAAAGGCCTTCCATCGATACAATCACAAACTG
CGTCTTCAGGGCTTGGCAGCTATTCGAAAACCAGAGTACGATCAACTGCTTAAAGATGGA
CTGACTGACACACAAAAAGACGACGATTCAGACAGCAACAGCAACAGCAACAGCAACAGC
AACAGCAACAGCGAGGAGGATACAGAATCGGACAGTGACGAAGAGTTTGGACTGCCTCGA
AAAATGGAACTGGCGTCGATCTCGGAAGCTGGAGATGGAGAAACGGCAAAAGACGAACTC
AAGGGAAGCCCTGTCATCTTCCTCAAGAGCCCCGAAGTTGAACCTAAGACACTGACGGTC
TACAAGAATGCACTGGGCCACGTATCACCCACTGAGTCGGGTATTCTTGGGGAGATTCAG
CGGGTGAATACTCTTCCGGAGGCTACTTCTGTGATCATCATGGCTGGAGGAGGACATTTT
GCTGCAGCGATCTTTCAACACTCGCCGAAAATCAAAAACACAATGGTTCCCCTAATTCTG
GAAACCAAATCATTTCACAGATACACCACTCGTCGAAGCCAGGGAGGTTCCCAGAGTGCT
TCTGATGGTTCAAAGGGTAAGGCCAAGTCTGTGGGTTCCTCTCTGCGACGATATGGAGAG
AGCCAGTTGCAGATGGAGGTGAAGGAGTTGCTGACTTCTCCCGAGTGGAAGAAGCGTCTG
TTACCTGGCCTTCCTACGTCTGCCGCTAACATTTACATTCGAGCCAGTGGAAAGGGCAGT
CGTGGTCTTGTTCTTGGGTTCGAGGGATGTCCTATTCCCAAAAATGATTCCCGAGTCAAG
AGTATCCCCTTCAACACCCGTCGAGCAAACTACACCGAGGTTCTGCGGTCCTGGACGGAA
CTGTCCACTGTCAAGGTTGTGGATGTGAGCAAAGAGGAAGAGGAGGCAGAAAAGACACGT
GAAAAGGAGGCCGAGAAGGCTCGGAAGGAGCAGTCGCGTCTTGCAGCGGCTGAAGCCAAG
AAGCAGAAGCAGCAGCAGTCCCAACCTACCACCGTACCACTCACTCCTCTCATGAAACAG
ACTTCTGAGATCACTGAGTTGATTCGAAAGAGTCGGGCTCCTAAGCTCATTTCGTACCTC
AAACTGCAAAAGCTCAAGTCGCCCTACCAGCTGGAGTTCCCCGAAGGAGATAAGACAGGC
ACATTGTGTCCTACTGCTCTGCATTACGCCGCTAAAGAGGGTAGCGCTTACATTGTGAGT
GTCTTGTTGAAGCAGCTAGGGGCCGATCCTACCGTTACCAACTCGTTTGGAAAGACTGCT
TGGGATCTGGTTTCGGATAGTAAGACCCGGGACACTTTCCAGCTGGCAAGAGGAGCTCTT
GGAGAAGACAAGTGGGACTGGAAAGCCAGTCATGTTGGAGAAGCTCTTACCGATGAGCAG
ATTGAACAGCGAGACAAAAAGGAGGCTGCTGAACACGACCAAAAGGTCAAACAGTCCATT
GCCCAGCAGGAGGAGGAGCAGAAGGAAAAGGAGTCCAGCAAGAGATACGAAAAGATTGTC
GCCAAGAGTGGACTGGGAAAGAGACTGCCTCAGATGGCCACCAAGCTGGAGGACACTAGA
GGTCTTTCTGATGAAGCAAAGATGAGACTCGAGCGAGAGAGACGAGCTCGAGCTGCCGAA
GCACGGTTTGCAAAAAAATAAGGCTAAATAGAATCACTGTAGACACTAGCGTGCTAATAT
ATATTCTCATGAATGCTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26081g_CDS-001

Protein length: 607 aa.
Product: Component of a Cdc48p-complex involved in protein quality control, putative

>YALI0E26081g_CDS-001 MAKAKQAPTAYFLYDLPESILKSLKVYDFNGVLRSEETEVKPSSQFSAEEKAFHRYNHKL
RLQGLAAIRKPEYDQLLKDGLTDTQKDDDSDSNSNSNSNSNSNSEEDTESDSDEEFGLPR
KMELASISEAGDGETAKDELKGSPVIFLKSPEVEPKTLTVYKNALGHVSPTESGILGEIQ
RVNTLPEATSVIIMAGGGHFAAAIFQHSPKIKNTMVPLILETKSFHRYTTRRSQGGSQSA
SDGSKGKAKSVGSSLRRYGESQLQMEVKELLTSPEWKKRLLPGLPTSAANIYIRASGKGS
RGLVLGFEGCPIPKNDSRVKSIPFNTRRANYTEVLRSWTELSTVKVVDVSKEEEEAEKTR
EKEAEKARKEQSRLAAAEAKKQKQQQSQPTTVPLTPLMKQTSEITELIRKSRAPKLISYL
KLQKLKSPYQLEFPEGDKTGTLCPTALHYAAKEGSAYIVSVLLKQLGADPTVTNSFGKTA
WDLVSDSKTRDTFQLARGALGEDKWDWKASHVGEALTDEQIEQRDKKEAAEHDQKVKQSI
AQQEEEQKEKESSKRYEKIVAKSGLGKRLPQMATKLEDTRGLSDEAKMRLERERRARAAE
ARFAKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG