YALI0E25696g

Overview

Description similar to uniprot|Q9HGM9 Schizosaccharomyces pombe DNAJ domain protein
Locus type CDS
Locus tag YALI0E25696g

Location

Species Yarrowia lipolytica Positions 3048062..3049614
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1553 (nuc.)
Previous locus YALI0E25674g Next locus YALI0E25718g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25696g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25696gYALI0E25696g_mRNA-001YALI0E25696g_CDS-001

Nucleotide sequence

 

>YALI0E25696g
ATGACTACAGCACTAGAATACAAGGAGCAGGGAAACGTGGCCTACAAGGCGGGCCAGTAC
TCGGAGGCCGTCCATCTCTACACCCAGGCGGTCGATGAAGAGCCCACCAACGCTACGTAC
CTCAACAACAGATCAATGGCCTACTTTCAACTGGGCAAGTACGAGGACGCTTTGATGGAC
GCACAAAGAGCCAACCTTCTGGCACCCCATGCCGAGAAGACTCTGTTGCGTATCGGCAAG
ATCCAGACATCTCTGGGCCACTGTGAGGACGCCCTCAACACTTTTTCGTCCATCCACCCT
CCCGTGGAGAACCTGGACACCCACAACGCCGCCCAGATGTACTCGTTGATTCAGCAGGCT
AAAAACATGATTGCAGGAGGCAATCCCTCGTTGGCCAAGCATTCCATTTCCCAGGCCGAG
GCTCTTCTGGGCCGGTTTGCCAAGCCTCCCCGAGCATGGGCTCTTCTCAAAGTCGAGGCC
ATGATTGGTGCTGGCGAGCTTGACCAGGCCTCTTCCAATGTCGTTGGTCTGCTGCGAGAG
GACTCTTCTGACCCTCTGGCACTGACTCTGCGAGCTCAGATCCTCTACTATAACGGTGAG
ATGGCTGCTGCTATCACCCATCTGCAGCAGGCTCTTCGAAACGATCCCGATAACTCCAAG
GCTCGAACTCTGCTCAAGCAAATCAAGGAGATTGACCGAAAGCGAGAGGAGGGTAACTCA
GCCTTCAAGTCCGGGCAGTACGCACGAGCCAAGGAGCTGTACACCGAGACCCTGGCCCTG
GATCCCACAAATAAGCTGGTCAACGCCAAGATCTATTCCAACCGAGCCACTGCCAACGTT
AAGCTCGGTGACTTCGAGGACGCTCTCAAGGACTGCGATCTGGCTCTGGAGGCCGACCCG
TCGTTTGTCAAGGCCCGAAAGACCAAGGCCCGAGCTCTGGGCTCGCTCGAAAAGTGGGAG
GATGCTGTCAACGAGTTCAAACAGGCCATGGAGGCCGATCCCAGTGACAACTCGTTGCGA
TCCGAGCTCCGGGACGCTGAGCTGCAGCTTAAGATGTCTAAGAGAAAGGATTACTACAAG
ATCTTAGGGGTGGAGAAGAGCGCCAACGACACGGAGCTCAAAAAGGCATACCGAAAGAAG
GCTCTGCAGTTCCACCCTGATAAGAACCCCGATAACGACGAAGCCGCAGAGAAGTTCAAG
GATGTCGGAGAGGCTTATGAGACGCTCTCGGACCCGCAGAAGCGACAGCGATACGACTCT
GGTGTCGATCTCCAGGACCCTAACGACATGTTTGGAGGAGGAGGAATGGGCGGAGGCATG
CACGGAGGAATGGGCGGCATGGGCGGCATCGATCCTGAAACCCTGTTCCGAATGTTTGGC
CAGCAGGGCGGCGGAGGCGGCTTTGGAGGTGGAGGCTTCCAGCAGGGAGGCTTCCAGCAG
GGAGGTTTCCAGGGTTATCCTTTCTAAACTCGTTGACATGGACATCATGGAACAGGCATT
GGCATTGTATAGGCATTATTATTTAATAGAGTGTGTCGATAGATTGAAAGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25696g_CDS-001

Protein length: 489 aa.
Product: DNAJ domain protein, putative

>YALI0E25696g_CDS-001 MTTALEYKEQGNVAYKAGQYSEAVHLYTQAVDEEPTNATYLNNRSMAYFQLGKYEDALMD
AQRANLLAPHAEKTLLRIGKIQTSLGHCEDALNTFSSIHPPVENLDTHNAAQMYSLIQQA
KNMIAGGNPSLAKHSISQAEALLGRFAKPPRAWALLKVEAMIGAGELDQASSNVVGLLRE
DSSDPLALTLRAQILYYNGEMAAAITHLQQALRNDPDNSKARTLLKQIKEIDRKREEGNS
AFKSGQYARAKELYTETLALDPTNKLVNAKIYSNRATANVKLGDFEDALKDCDLALEADP
SFVKARKTKARALGSLEKWEDAVNEFKQAMEADPSDNSLRSELRDAELQLKMSKRKDYYK
ILGVEKSANDTELKKAYRKKALQFHPDKNPDNDEAAEKFKDVGEAYETLSDPQKRQRYDS
GVDLQDPNDMFGGGGMGGGMHGGMGGMGGIDPETLFRMFGQQGGGGGFGGGGFQQGGFQQ
GGFQGYPF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG