YALI0E25674g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E25674g

Location

Species Yarrowia lipolytica Positions 3046493..3047886
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1394 (nuc.)
Previous locus YALI0E25652g Next locus YALI0E25696g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25674g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25674gYALI0E25674g_mRNA-001YALI0E25674g_CDS-001

Nucleotide sequence

 

>YALI0E25674g
ATGTTTCTCCCTAGAGAACTCTGGCTACAGATCCATCCCCTTCTAGATGGACCATCGTTC
CAGGCTCTTGCCCAGACGTGCAAATGGCAATGGCAACAATACAAACAAGTCGAGGAAGAC
TTCTTCAGGGTGATGAATATGATCCCGGCTGTCCACACGTTGGCCAACCCTCCTAAATCA
TACGACCCGGACTTTTGGCGCGGTTGGTTTGGCAGTTACTTCATGAAAATTCTGGAGCCC
AGTGGAGATGCGGTACCCTTCACTATCCACTTTGATGCACCCTCCAAAGACGATATTGCT
TCATTGTCTTCCCAGCTAAACAAAAAGGTACATTTCAACTTCCAGAATCGCCCGAAACTA
CGTTACATTGTCGACTTTGAGCACTGGAACGTGTCTGCGGTGGAGCTCGGAGATCACGTG
CGAAACACCAACAGAAACAGCGAACATCGACTCGTACTGGACCACATATCCAACCAACTG
GACGAAGTATGCATCGAAAACGATGGGCAAGGCCTGAAGGTTGTCTGGAAGAAACCCAAC
CCCAAAGACAACCTCAGTATCGAAACGCCCGTTGTGCCACCTCTTTTGGATGGTATTTTT
ACCTGCTGGTTATCAGATAGACCCAAGTCTGTCCATGACATCTTCTTCTATGCCCAGAGT
GACTTTTTTGACAACACTCTTGTCTACTACGTCGACTGGAGGACTTTATCGCTTATCCCT
GTGTCCAAACAGTGCTACCCATTCGACTCGCACCCTATGGCGATGAAAAATAGCCTCTAT
TCAGGAATCTGCAATGGCAATTTTCTCTATTTTACCCAGGATACCATTTACATTCGAAAT
ATCCTTTCCGATAGCCTCATGTTGCTGAGTTGTCGAGAACCCCAGCTTATCCACTACGAT
AACAGATACTTTATCTACATTGATGACAATGGCGAGTATGTTGTTGACGTACTACGGGGT
AAGGTGAACACTCTTACTCCGCGAAACATTCTCAAAGCTATCCCTTCCATTCATATGGTC
TCTATCACTGAAGAGAAGGGAGTGGAATGCTGGATACCCGGATGGGCTAGTCTCGGACAA
CTTAAGGCTGGAGAGAGCAAGGCCATGACTGCGGGTTTTGCCTATGGATGCATTGAGAAT
GGAGAAGTGATTTTTCGTCGTGACATGACGTGACATGACCACTGGAACGGCGTAAATAGT
GCATATTGCTTCTACGACAGAACACAGGGCTGGAAGTGTCGAGAAAAACATGTAAAAAAC
TTCTCTAGCTATTGTAACGTATGTACATACTGTAGATGAATGCTTCTCAAGACGACAAGC
TATGACCTTAGAAATAACTTCGCCCAAGCAGCCATATCATTGCAAATGGAAATAAACCCC
ATAAAACAACTCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25674g_CDS-001

Protein length: 391 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E25674g_CDS-001 MFLPRELWLQIHPLLDGPSFQALAQTCKWQWQQYKQVEEDFFRVMNMIPAVHTLANPPKS
YDPDFWRGWFGSYFMKILEPSGDAVPFTIHFDAPSKDDIASLSSQLNKKVHFNFQNRPKL
RYIVDFEHWNVSAVELGDHVRNTNRNSEHRLVLDHISNQLDEVCIENDGQGLKVVWKKPN
PKDNLSIETPVVPPLLDGIFTCWLSDRPKSVHDIFFYAQSDFFDNTLVYYVDWRTLSLIP
VSKQCYPFDSHPMAMKNSLYSGICNGNFLYFTQDTIYIRNILSDSLMLLSCREPQLIHYD
NRYFIYIDDNGEYVVDVLRGKVNTLTPRNILKAIPSIHMVSITEEKGVECWIPGWASLGQ
LKAGESKAMTAGFAYGCIENGEVIFRRDMT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG