YALI0E25201g

Overview

Description similar to uniprot|P53049 Saccharomyces cerevisiae YGR281w YOR1 ATP-binding cassette transporter protein
Locus type CDS
Locus tag YALI0E25201g

Location

Species Yarrowia lipolytica Positions 3016537..3021124
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 4588 (nuc.)
Previous locus YALI0E25179g Next locus YALI0E25112r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25201g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25201gYALI0E25201g_mRNA-001YALI0E25201g_CDS-001

Nucleotide sequence

 

>YALI0E25201g
AACCAGCAAGTGGGGAGACGCCACCTTTTTCTCGCAGCTTTTATACTCGGCACTGCGGCG
TTGCTACTTAACCTCCTTGAATCTCGATTGGACTGCTAGATCATTGAGATCAGTCGACAA
ACAGCTCAGATCAGCCACAGATCAGACAGCTGATTTCAGATCATCAGTTTCTCACACCAC
ACCCTCAGTCTTCCACACATGGGTAAAACCGAAGTGACACAGGAGAGTCTAGAATGCGGG
TCGGTCACGTCCTCGCTGGGGAAAAAGCCCTTCTCCATCATCACACTCTTCACCGGCAGA
CGCATTCCTCCGGTACCTACTGAAAAACCAGATTCGGCCGAAGAACGGGCCGGGATTCTG
TCAAAATTGACCTGGCAATGGCTTAGTCCATTGTTGAAAGTGAGTATGGCTATAGGATAA
CTTCTGATGTCTTCTTCAATACTAACACAGACTGGTTACTTACGAAACATTGAACGTGAG
GATCTGTATAAAGTGAGAGAGAGAAACTCGGCGGCTGTGATCCAGCAGCGACTTGAATCC
AATCTCGAAAAACAATACGCCAAGTACCACGCCAAACTGCTCAAGAAAGGACTCTCGGAG
CAAGAGGCGCATCTCAAGCTGCAAGATTCAGCCAAACCCCTCGTCTTGGCTCTTAACCAG
ACGTTTTTTTGGAAGTTCTGGCTAGCCGGACTGTTTGCCCTAGTCAAGGACCTCTGTGGA
ATCGCCTCAGCTATGGTGTCACGTGTTCTGATCGAATACATTCAAGACAGATATCTCTAC
AGGGGGACAGACCGGGAACCTAAGGTCGGCCGAGGAGTCGGCCCCTCGATAGGCCTATTT
CTACTGGCCGTAGGAGTCACTTTCTTCTTCAACCACATGTTCTACAATGTCAAGATGGTT
GGAGCTCAGGCTCGTGCAGCTCTGGTGGCCGTCATCTACAGCAAGAGTACCCGTTTGAGC
GCCAAGGGCCGAGCTCAATACACCACAGGCAAGATCACAAACTTGGCAGCTATTGACGCA
CATCGAGTTGATCTCAGTTGTGAATCTTTCCACTACATTACTATCTTTTTGCCTGTTGTG
GGTTGTGCCATTGCTGTACTCGTGGTCAACCTCAAGGTCGCAGCTCTAGTTGGAATTGCG
ACCATGATTGTCTTGATCTTTGTCGTCGCAGGCATCACCATCTTCTCTATGAAGCTGCGA
GCCATCATTGTCAAGCTCACGGATAAGCGAGTCACGTATATCCGAGAAGCTCTGCAGTCG
ATTAGAATCATCAAGTACTACGGCTGGGAGGTTCCTTACTGTGACAAGATCAAGAAGGTG
CGTCTTGACGAGACCCGTAACTACGCCAAGATGGGCTCGATTCGAGGAACAGCCATTGGT
ATGTTTCAGGCACTCCCTATTTTGGCAGGAGCGTTGTCTTTCATCACCTACGCTGCTCTA
GGTCATGGAACTGATCCTGCTCGAATGTTCTCTTCTCTGACGCTTTTCAATTTACTCCTG
CCTGCTCTTGCTGTTCTTCCCCAGGCCCTCCAGGCTGCTGGAGACGCTCGAGTGGCTCTC
AGACGTATCCAGCGGTTCCTTGGGGCCGAGGAGTCGACTCCCACTACAGTTTTTGACGCT
ACTCTTGAATCTACTGATGACGCTGTGATTGTGGAAGACGCCTCTTTCATCTGGCCAGAA
GTTGTCGATGATAAGAGCGACAAAGAGAAGGCTAAAGATGCAAAGAAGGAGGAAAAGGAT
AAGAAGAAGGCCGAGAAGAAGGCCAAGAAGGCGGCCAAGAAGGCGGCCAAGGAGATCGCG
GTGGTTGTGGAAGAGGAGGTGGAACACGAAAAGACCGAGGGATCCAGTGAGTCTGAAAAG
GGTACTCTTAAGTCGACTTTCAAGGGCTTCAACAACCTGTCTTTCAAAATCAAGCGGGGT
GAATTTGTCGTTGTTACCGGTCCCATTGGTTCTGGAAAGTCGTCTCTTCTTGCTGCCATC
ACTGGATCTATGGTTTTGACAGGCGGTTCCGTGCGAGTGTCGTCCACAGAGTGGATTGGA
TGTCTGGAGCCGTGGATTCAAAACGCCACAGTTCGAGATAACATTGTGTTTGGGCGAAAA
TTCGACTCTGAATGGTATAGAACTGTGGTTACTGCCTGTCAGCTGAGCCAGGATCTCAAA
ATAATGACTCACGGAGACAATACCATGATTGGAGAGCGAGGCATCACAGTTTCGGGCGGT
CAAAAAGCTCGAATCAACCTCGCACGTGCTATATATGGAAACCCCGAGATTCTCATCATG
GACGACGTCCTGTCGGCTGTGGACGCTCGAGTAGGTGCTGGTATTGTGGACGATTGTCTT
CGAGGCTTAGCCAAGAACTCCACTCGAATTCTGGCCACCCATCAGCTGTCTGTGCTGCCT
AAGGCTGATCATGTGATTTTCATGGATGCCGAAGGCCAGTTTCATATTGGTACGTACCAA
GAGCTGGAGGCTGACAATGAGCAGTTCAAGGCTCTTTTGGCGGCTGGTTCCATGTCCAAG
GAGGAGGTGGTTGCTGTCGACGAGACTGAGGTTGTTATTGAAGGCGATCTTGAAGACGAC
TGCGATAACAAGGAGGAGTATGAGGATGCAGCTGAGACCATTTCCATTTTGGCAGATGCC
ACTCAAGAGCTGCAAAAGGTGACCACTACAGTCTCGGCATTTGAGGAGAACGATAACATG
ATGGAGGAAGAAGAGCGAATGAGAGATGCAGTTGGTTTGCATGTGTACTGGCAGTATTTT
CGTCAGGCCAACCCCAGTAGGGTCAAGGTAATGATGTTCATTGGCATGATCTTCATTTCC
ATGATTGTGATTGCCTTTCTGTTTGTCTTCACATCTGTATGGCTCTCGTTCTGGACAGGT
GACCGTTTCCATGCCTCCAGAAACTTCTACACCGGAATTTACATCATGCTGGGTATTCTT
CTGCTTCTTGCTGTGGCAGGATACATGATTGTCAATGAGATCAACTCTGCCATGGCAGCA
AGAAATCTACACAATCATGCTTTGGACTCGGTGTTCGCTGCACGAACTTCTTTCTTCGAT
ACCACTCCTCAGGGTCGTATCATCAACCGGTTCACCCGAGACACAGACTCTCTGGATAAC
GAGCTGGCTATGCGATTGACTATGTTGTTCTTTGGCGTCTCCGCATTCTTCTCCAACTTC
CTGCTTACTTGTGTCTACGTTCCTTATGTGACTCTTGTGCTTGTCCCTGTCGGTTTTGTC
TTCTACGTTTCTCTAGGTTACTACCGAAAGTCAGCTCGTGAAGTCAAGCGAATTGACTCC
ATTGAACGGTCGCACATGATGAGTGTCTTCAACGAGTCCATTTCCGGTATGCCCGTCATC
ATCATGTACAAGGCCCAGCATCGGCTCATGAACAAGCTTCAGGCTACTCTCGATGATATG
GACAGTGCCTACTTCCTCACTGCTGCAAACCAGCGATGGCTGTCTCTCCGTCTGGATGGT
CTGGGTTCTTTGGTCGTTCTGGTGGCCACTATTCTTGTTGCTGTCGGAGTCTTTGATCTC
ACCCCTTCCAACATGGGTCTGATCATTTCCGCGGCCTCCTTTATCCCCGAAGTCATGTCT
ATGGTTGCCCAGGCCGTTGCTGAACTCGAAAACTGCATGAACGCCACAGAGCGAATTCTT
TACTACAAGGACAACATTCCTGCTGAGGCTGCTCGAGAAGTGGACGGTACAGAGCTCGAC
CAGCGACCCAACTGGCCTGAGCAGGGAGCCATCAGCTTCAACAATGTGTCCATGAAGTAC
CGAGATGGACTTCCTTACGTGCTCAAGTCATTGTCTGTCGACTTTCAGGGAGGACACAAG
GTGGGTATCTGTGGACGAACAGGAGCCGGTAAGAGTACCATCTTGCAGACTCTGTATCGA
ATTGTGGAGCTTGCTGAGGGTTCTATTACTATTGATGGTGTTGACATTTCGACTATTGGA
CTGCATCAGCTTCGGTCTCAGTTGTCCATCATTCCCCAGGAGCCAGTTTTGTTCCTGGGC
ACCATCCGGTCTAATTTGGATCCTCTGGAGCAATACTCTGATGCTGAGCTATGGGGTTCT
CTACGACGGTCTGGACTTCTCGATGAAGGAGAGACTGAGGGTAAGTTTCATCTGGATCAA
AAGGTGGAGGCTGACGGCAGCAACTTCTCTCTAGGTGAGCGACAGCTGCTGACTCTAGCC
CGAGCACTGCTTAGAAACACCAAAATTTTGGTGCTGGACGAAGCCACATCAAATGTCGAC
TACAAGACGGACAAGCTGGTTCAGGAGACCATTTCACGGGAGTTTGGCCACTGCACGATT
CTGTGTATCGCCCATCGACTGCGAACCATTGCCAAGTATGATCGTATTTTGGTGCTTGAG
TCCGGCGAGATCAACCAGTACGACACGCCCTGGAACTTGTACAACGACAAGGAGGGTATT
TTCCGAGGTATGTGTGACACCTCCGGGTTGAACGAGGTAGACTTCAACAAGTGAAAAATT
ACGATGAGGGTAGACAGTCTGAGATGAGACTGATAAATTATAGAGAAAAAATGTTTGATT
ATAGCAGTAGTGAATGTATTGTATGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25201g_CDS-001

Protein length: 1415 aa.
Product: Plasma membrane ATP-binding cassette (ABC) transporter, putative

>YALI0E25201g_CDS-001 MGKTEVTQESLECGSVTSSLGKKPFSIITLFTGRRIPPVPTEKPDSAEERAGILSKLTWQ
WLSPLLKTGYLRNIEREDLYKVRERNSAAVIQQRLESNLEKQYAKYHAKLLKKGLSEQEA
HLKLQDSAKPLVLALNQTFFWKFWLAGLFALVKDLCGIASAMVSRVLIEYIQDRYLYRGT
DREPKVGRGVGPSIGLFLLAVGVTFFFNHMFYNVKMVGAQARAALVAVIYSKSTRLSAKG
RAQYTTGKITNLAAIDAHRVDLSCESFHYITIFLPVVGCAIAVLVVNLKVAALVGIATMI
VLIFVVAGITIFSMKLRAIIVKLTDKRVTYIREALQSIRIIKYYGWEVPYCDKIKKVRLD
ETRNYAKMGSIRGTAIGMFQALPILAGALSFITYAALGHGTDPARMFSSLTLFNLLLPAL
AVLPQALQAAGDARVALRRIQRFLGAEESTPTTVFDATLESTDDAVIVEDASFIWPEVVD
DKSDKEKAKDAKKEEKDKKKAEKKAKKAAKKAAKEIAVVVEEEVEHEKTEGSSESEKGTL
KSTFKGFNNLSFKIKRGEFVVVTGPIGSGKSSLLAAITGSMVLTGGSVRVSSTEWIGCLE
PWIQNATVRDNIVFGRKFDSEWYRTVVTACQLSQDLKIMTHGDNTMIGERGITVSGGQKA
RINLARAIYGNPEILIMDDVLSAVDARVGAGIVDDCLRGLAKNSTRILATHQLSVLPKAD
HVIFMDAEGQFHIGTYQELEADNEQFKALLAAGSMSKEEVVAVDETEVVIEGDLEDDCDN
KEEYEDAAETISILADATQELQKVTTTVSAFEENDNMMEEEERMRDAVGLHVYWQYFRQA
NPSRVKVMMFIGMIFISMIVIAFLFVFTSVWLSFWTGDRFHASRNFYTGIYIMLGILLLL
AVAGYMIVNEINSAMAARNLHNHALDSVFAARTSFFDTTPQGRIINRFTRDTDSLDNELA
MRLTMLFFGVSAFFSNFLLTCVYVPYVTLVLVPVGFVFYVSLGYYRKSAREVKRIDSIER
SHMMSVFNESISGMPVIIMYKAQHRLMNKLQATLDDMDSAYFLTAANQRWLSLRLDGLGS
LVVLVATILVAVGVFDLTPSNMGLIISAASFIPEVMSMVAQAVAELENCMNATERILYYK
DNIPAEAAREVDGTELDQRPNWPEQGAISFNNVSMKYRDGLPYVLKSLSVDFQGGHKVGI
CGRTGAGKSTILQTLYRIVELAEGSITIDGVDISTIGLHQLRSQLSIIPQEPVLFLGTIR
SNLDPLEQYSDAELWGSLRRSGLLDEGETEGKFHLDQKVEADGSNFSLGERQLLTLARAL
LRNTKILVLDEATSNVDYKTDKLVQETISREFGHCTILCIAHRLRTIAKYDRILVLESGE
INQYDTPWNLYNDKEGIFRGMCDTSGLNEVDFNK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG