YALI0E25179g

Overview

Description weakly similar to uniprot|O74852 Schizosaccharomyces pombe SPCC18.02 Uncharacterized MFS- type transporter
Locus type CDS
Locus tag YALI0E25179g

Location

Species Yarrowia lipolytica Positions 3012325..3014169
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1845 (nuc.)
Previous locus YALI0E25157r Next locus YALI0E25201g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25179g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25179gYALI0E25179g_mRNA-001YALI0E25179g_CDS-001

Nucleotide sequence

 

>YALI0E25179g
ATGGAGGCTGTTCTTCCTGGCAGGATCGGATTCAAAGTCACCACCGCACCCATCGCCCCT
ATTGGAATCGAGCAGAAGACAGGCCCTACTGAAACCCGACAGAAAGTTACCCGAAAATGG
TCTGCGTTCAAGTCATCTCCTGTTTACAAACTGGTGGATGTTGCAGAATGGCACATTCCA
TGGCTACGAACGCTCAAAATGGTCAAATGGCGTTCGTCCAACCCGGTTATCATCACTTCC
ATTACCCTGGCAGTCTTCACCGACACATTCCTTTACGGAATTGTGGTGCCAGTCATTCCC
TTTGCATTTTCTTCCCAGATGGGGGTGCCTGAAGACGATGTTCAGAACCAGATTTCCCGT
GCCCTGGCGCTTTACGCAGCCGGCCTTGTCGTTCTCTCGGTTCTCACAGGCGTTGTGGCC
GACCACATGAAACGCAGACGGCCAGTAATGCTATTTGGACTGCTTCTGTTGATTGCAGCT
ACAGCAATTGTTTGCTGGGCCAAGTCTCCTGGCGTGTATGATCTCGGTCGATTCATCCAG
GGAGCCAGCGGAGGAATTGTGTGGGTGTCCGGACTGGCGATCCTGGCTGATGCCTCGGAT
CCAGACACGATAGGCATGTTTATGGGCTTCCCAGACATTGGAATGTCATTAGGCACGTTT
CTGGGACCAACTATCGGAGGAGCTGTGTACGATAGAGTTGGCTACAACGCTGTATTCTAC
GTCTCCTTCGGAGTTTTGGGTCTAGATGTCATTTTGCGGTTAATTATGCTGGAGAGATCG
GACTACAAGAGACTCTATCCGGCAGAATTTGCCCAGGAGGAGCTGGAAAAGGCGAAAAAG
AAGGCCGAGGAGGCTGAGCAGAAACGTATCGAAGAAGGCATCGATATCGAAGATTGGGAA
TCGACTATGGAGACCGAAGCTGAACCTGGTCCTTCTCCTCAGGCTATCATGTGGTTCCAG
GTGTTTGGAAGAAAGGTGTGGGTTCAGATCCCACCCATTATTCTGCTCCTCAGGCATCCT
CGTATCCTCGTCATCTTCTTCCAAGCAGTCATCTTTGGCTGGTGTGTGGGAGCTCTGGAT
GCTACCCTACCTATGCATCTGGATGAGATTTTTGGATTCGGGTCTCTACAGGCTGGTCTA
GTCATGTTGGCTCTTGCTATCCCTTCCCTGATCGGCCCAGCCGTCGGAATGATGGTTGAC
AAGTTTGGAGTCAAGTTATTTGCGACTCTGGGTTTCATTTGTGCCTGCCCCTGCTTCATT
CTTCTCCGTCTACCCGACCACCACAATGTGAGACAGGTGGTTCTTCTGTGTGCGCTCCTA
GCACTTCTGGGAGCCTCTCTTGTTGTATTGGTTGGTCCTGTGATGACCGATCTGGCTTCT
TTCACTGCCAAACTCGAAAAGCGACGTCCTGGCTTCTACGGCAAAGGAGGAGGTCTGGCT
TCTGCTTTTGGTATCTTCAACGTCGCCTTTTCTATCGGTATCATCATTGGACCGCTTCAA
GCAGGAGCCACCAAGGACAGAAGTGGCTGGGGAATGATGGTCTTGTCTGTCGGACTTGTT
TCTGTCATATCAGCAATCCCTACGTTCCTCTTCTCGGGAGGATACCTCTTCTCCAAGGCT
AACAAGGGCAAGACGCTCTTCCAGCGAGTTTTCCGGTCGCCCAACGCGTGGGAAAAGGAG
GAGAAGGCAGCTCGAGAGGAGGAGCGAAGACGGTTGCGAATGGAAAGGTCTAAGGAGGAA
ACTGGAGACGGAGGGATAGAGAAGAGTCTGGGTGTGAAGGAGATGGATATGGGAATTGAT
GACACGACATAGCATACATAATTATTTATACATTGCATGATTAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25179g_CDS-001

Protein length: 604 aa.
Product: Conserved hypothetical protein

>YALI0E25179g_CDS-001 MEAVLPGRIGFKVTTAPIAPIGIEQKTGPTETRQKVTRKWSAFKSSPVYKLVDVAEWHIP
WLRTLKMVKWRSSNPVIITSITLAVFTDTFLYGIVVPVIPFAFSSQMGVPEDDVQNQISR
ALALYAAGLVVLSVLTGVVADHMKRRRPVMLFGLLLLIAATAIVCWAKSPGVYDLGRFIQ
GASGGIVWVSGLAILADASDPDTIGMFMGFPDIGMSLGTFLGPTIGGAVYDRVGYNAVFY
VSFGVLGLDVILRLIMLERSDYKRLYPAEFAQEELEKAKKKAEEAEQKRIEEGIDIEDWE
STMETEAEPGPSPQAIMWFQVFGRKVWVQIPPIILLLRHPRILVIFFQAVIFGWCVGALD
ATLPMHLDEIFGFGSLQAGLVMLALAIPSLIGPAVGMMVDKFGVKLFATLGFICACPCFI
LLRLPDHHNVRQVVLLCALLALLGASLVVLVGPVMTDLASFTAKLEKRRPGFYGKGGGLA
SAFGIFNVAFSIGIIIGPLQAGATKDRSGWGMMVLSVGLVSVISAIPTFLFSGGYLFSKA
NKGKTLFQRVFRSPNAWEKEEKAAREEERRRLRMERSKEETGDGGIEKSLGVKEMDMGID
DTT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG